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16S rRNA Gene Amplicon Sequencing Data from Flooded Rice Paddy Mesocosms Treated with Different Silicon-Rich Soil Amendments
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Reclassification of the Clostridium clostridioforme and Clostridium sphenoides clades as Enterocloster gen. nov. and Lacrimispora gen. nov., including reclassification of 15 taxa.
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2024 Progress Report
… from the DOE Systems Biology Knowledgebase (KBase), the National Microbiome Data Collaborative (NMDC), and Berkeley Lab … 2,475 — had active proposals with us, along with more than 15,000 secondary users who made use of our data. We … a unique cyanobacterial protein and understand its role in photosynthesis. In collaboration with Berkeley Lab Computing …
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How Microbes Can Protect Plants in Drier Straits
A mini-episode looking at the efforts of Pankaj Trivedi, whose New …
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DOE JGI Interns Share Their Summer Experiences
… the field, work at the lab bench, and also do some computational analyses at their desks. As part of the DOE JGI’s … briefly about their time at the JGI at http://bit.ly/JGI15summerinternsvids . Click here to check out photos of the interns. For this second year of the DOE …
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JGI Announces 2025 New Investigator Portfolio
… [middle] Sundy Maurice, Bridget McGivern, Darcy McRose, Ranjani Murali, Ernie Osburn, Ravikumar Patel, Guy Polturak, … Flavia Winck Vischi, Jennifer Wisecaver, Yaqi You, Yong Zhang and Zhiping Zhong. (All images courtesy of the researchers) Each year, the …
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Fine-scale evaluation of two standard 16S rRNA gene amplicon primer pairs for analysis of total prokaryotes and archaeal nitrifiers in differently managed soils
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A Shrubbier Version of Rubber
Right now, our natural rubber comes from just one tree species: Hevea brasiliensis . It’s great at … desert shrub that’s native to North America: guayule.  This episode was made in collaboration with our friends at the …
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Tanja Woyke
After studying the mechanism of action of antifungal natural products and their derivatives … Editorial Board Member for ISME J (Senior Editor 2016-2021), Peer J (2015-2019), Scientific Data (2017-2019). …
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Picking Up Threads of Cotton Genomics
Analysis reveals cotton genome stability across global lineages . Come harvest … paper published April 20, 2020 in  Nature Genetics include Jane Grimwood and Jeremy Schmutz of JGI’s  Plant Program , … to other plant genomes. “Globally, cotton is the premier natural fiber crop of the world, a major oilseed crop, and …
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JGIota: Looking Back at Sequencing for Soybeans
… have been able to look into soybean’s strengths – along with a fungus that threatens this important crop. Hear … work from researchers Gary Stacey (University of Missouri), Peter van Esse (The Sainsbury Laboratory) and Sebastien …
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JGI Earth Month: Kjiersten Fagnan Reflects on Shelter-in-Place Effects
In   April 2020, we mark both the 50th celebration of Earth Day on April 22, and DNA Day on April 25.  On March 17, 2020, a …
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