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Machine learning methods were applied on sequenced fungal genomes to classify gene families. The … data generated in part through the 1000 Fungal Genomes Project, including 55 newly-sequenced species.  The Impact … in correctly predicting plant pathogens (blue) vs saprobes (green). (From Haridas S et al.  Studies in Mycology , 2020.) …

Prodcast,” a podcast about the science and scientists of secondary metabolism.  DAN: Welcome back to Natural Prodcast! … know, in bacterial investigations. You’ve spent your whole career as far as I’m aware working on specifically fungal … so, so cheap to sequence. Right now, for our particular projects, we’re not doing that right now, but we might. I …

… reveals the microbial community involved in a bioremediation effort. The Science In 1999, the Environmental Protection … Researchers  identified two bacteria,  Dehalococcoides mccartyi and  Dehalobacter restrictus,  that work together to … to analyze the resulting metagenomic data. (Data from the project are available on the  JGI Genome Portal .) The team …

In honor of the JGI's 25th anniversary in 2022, we have … which is the fastest way for plants to convert carbon dioxide and water into sugars and oxygen. Both … strengths into other plants. A brief timeline of sorghum projects at the JGI: 2009: JGI and collaborators use …

… … DAN UDWARY: Hey, everyone! Welcome to the “Self Promotion Episode” of Natural … that move from Arizona to San Diego that– not in the same car, but at the same time. JACLYN WINTER: Yeah. I had the … DAN UDWARY: Nothing to be sorry about. Yeah, no, your project was really cool. The vanadium haloperoxidases are …

The Facilities Integrating Collaborations for User Science (FICUS) initiative was established in … and multidisciplinary nature of DOE mission science projects, this initiative aims to encourage innovative … and selection processes, making it difficult to propose projects that truly integrated the capabilities of more than …

With a background in experimental and computational surface physics, Dr. Goodstein held positions at … in support of JGI’s contributions to the Human Genome Project, he began developing larger comparative genomic … et al., 2012. Phytozome: a comparative platform for green plant genomics.      Nucleic Acids Research 40, D1178. …

Prodcast,” a podcast about the science and scientists of secondary metabolism.  Brad Moore, UC San Diego and Scripps … in his science. And he was working with some really cool projects at that time. So I was pretty stoked to be able to … And perhaps using biocatalysts we can do it in a cleaner, greener way. That’s one of our motivations, as well. Alison: …

… … DAN: Hello, everyone, and Welcome back for Episode 14 of Natural Prodcast . … And a little after that acquisition, I moved to another project. This time on vitamin C with a Gluconibacter .  And … to JGI?  NIGEL MOUNCEY: Yes, I’d got to this point in my career where I was spending probably a bit more time with …

… the JGI’s unpublished microbial genomes, with the expectation that faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This opportunity, … classroom modules Testimonials: … A primary purpose of this project is to bring educators from a broad range of …