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Natural Prodcast Episode 10: A Primer on Genome Mining
… and scientists of secondary metabolism. Welcome back for our second season of Natural Prodcast. This first … about what it is, hear me make a pained analogy to the California gold rush. And we’ll talk about a new JGI paper … notes with links to lots of other resources, especially for these primer episodes, if you want to dive deeper on all …
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Refining the Process of Identifying Algae Biotechnology Candidates
… -- copy to summary above^ as well ] The Science The recipe for growing algae as a source of sustainable biofuels seems … thrives in saltwater (halotolerant) and produces the most biomass to date of any such strain, identified through a … The Impact Part of the Department of Energy’s work toward developing a clean energy economy is developing alternative …
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Protocols
… protocols provided by JGI and the JGI user community below for DNA preparation tools, high molecular-weight DNA … Tips for High Molecular Weight DNA extraction: …
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FICUS
… The Facilities Integrating Collaborations for User Science (FICUS) call represents a unique opportunity for researchers to request the capabilities and expertise of … or be otherwise mission-aligned, but proof of concept for the demonstration of a technology that would be …
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User Support
… work and outline roles and responsibilities resulting in a formal Statement of Work (SOW). All work performed at the JGI is initiated via the Work Initiation … orientation to JGI systems to Investigators Preparation of formal Statement of Work (project roadmap) Users must …
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Tracking of enzymatic biomass deconstruction by fungal secretomes highlights markers of lignocellulose recalcitrance
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Overexpression of a Prefoldin β subunit gene reduces biomass recalcitrance in the bioenergy crop Populus
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Genome of Paspalum vaginatum and the role of trehalose mediated autophagy in increasing maize biomass
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Overexpression of REDUCED WALL ACETYLATION C increases xylan acetylation and biomass recalcitrance in Populus.
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JGI@25: Following Fungi that Pry Apart Plant Polymers
…   Usually, plants have the upper hand against any kind of biomass breakdown. They’ve spent millions of years evolving … a chemical and biological engineer at the University of California Santa Barbara. So plants don’t break down without a … tools beyond biomass breakdown, extending into biochemical production.    Over time, as these projects have delivered …
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Natural Prodcast Episode 5: Brad Moore
… and SIO. Oh, I should say what those are. Brad: What’s SIO, for all those listeners out there? Dan: Scripps Institution … Oceanography. And Brad and I, Alison, have known each other for quite a while because Brad was my postdoctoral advisor.  … so we’ve done some work to try to do some elicitation of production and did some meta-T [meta-transcriptomics] on …
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High‐Density Single Nucleotide Polymorphism Linkage Maps of Lowland Switchgrass using Genotyping‐by‐Sequencing
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