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A Plant Root Atlas for Tracking Developmental Trajectories
… 100,000 single root cells and combining the information with previously published datasets. The work was  recently published in the journal  Developmental Cell and provides a community resource that … of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence Berkeley National …
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JGI Pitches 2022 Visiting Faculty Program Collaborations
…   On November 3, 2021, the JGI and the Workforce Development & Education department of Lawrence Berkeley … are solicited annually for the summer term (May through August) and selected projects will receive stipend and travel …
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Fungal and plant gene expression in the Tulasnella calospora–Serapias vomeracea symbiosis provides clues about nitrogen pathways in orchid mycorrhizas
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User Support
… the JGI will move to a new login service, requiring the use of an ORCID account with two-factor authentication enabled to log in. Check our … with DOE JGI Science Program leads Solicit user feedback about your overall experience working with the JGI. Find out …
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Institutional User Agreements
… Every approved proposal starts with a User Agreement — before any work can begin, including … required by the DOE for all work performed in its User Facilities, is a legally binding contract.   All User … required paperwork to your institution. (Samples of the JGI User Agreement , JGI User Agreement for Federal Agencies , …
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The Busy World of Deep Sea Eruptions
… ecosystems. Hear from researchers Anna-Louise Reysenbach, Emily St. John, Gilberto Flores, and Peter Girguis about sampling these communities, and understanding how …
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User Advisory Committees
… All staff members of the US Department of Energy (DOE) Joint Genome Institute (JGI) … we nurture in our workplace and seek to establish with our stakeholders. The guiding principles for … The UEC represents the JGI user community and is responsible for providing input and …
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Webinar: MycoCosm Tutorial
… Learn more about JGI’s  MycoCosm data portal , an interactive … genome sequencing, or only “true fungi”? A(nswer): Our focus is on fungi, algae, plants, and the microbial world but … the tree and related publication the tree is still in development and not available for download. 9.  Q: Can I …
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The Case for Conservation
… crop yields.  The Science The fire moss Ceratodon purpureus is a short plant with a complex genome . Now, high-quality reference genome … HudsonAlpha. As the team discussed in a JGI podcast episode about the work, the effort to fully sequence the fire moss …
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A Cost-Efficient Way to Convert Yeast into a Cell Factory for Hydroxyapatite
… a high-value biomaterial with a wide range of industrial applications. The team was led by researchers at two … aims to enable the JGI user community to participate in the development and biotechnology applications of various … can synthesize other bio-based materials. For information about licensing the patented osteoyeast for hydroxyapatite …
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A Community Resource for Secondary Metabolite Researchers
… The Secondary Metabolism Collaboratory encourages user engagement. The Science In addition to the core set of … produced by groups of genes known as biosynthetic gene clusters (BGCs.) As reported in the recent Database issue of … an interactive public database for the research community. With more than 13 million BGCs in the catalog at the time of …
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Single Cell Research Group
… Research in the Woyke laboratory focuses on the utility of single-cell methods to access genetic … candidate phyla, major branches in the phylogenetic tree without cultivated representatives. The “Great Plate-Count … bulk of which belong to only three phyla. The Woyke group uses single-cell sequencing as a means to begin filling this …
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