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… which is known as the aerial surface of plants, is a comparatively understudied area of forest ecosystems as past … with her JGI mentor, Robert Bowers . She contributed to the analysis of mobile genetic elements across all of the metagenomes. Learn more about her time at the JGI here . …

… In April 2020, we mark both the 50th celebration of Earth Day on … that we use as indices. So it’s really quite a broad ecosystem approach. And that led me to get even more interested … biomass and then what the consequences are for the ecosystem. ALISON:  So, Ed is trying to understand how the …

… the bridge to help scientists and researchers achieve their analysis goals. Offering this tool establishes the JGI as a … attempt to put them back into the original genomes. These metagenome-assembled genomes (MAGs) that came from shotgun … like plasmids, the picture is far from complete.  In 2021 , scientists at St. Jude Children’s Research Hospital …

… of fungi, by lifestyles. The machine “learned” to identify data generated in part through the 1000 Fungal Genomes … fungal lifestyles of saprobes and pathogens based on the data provided. In this proof of concept test, the team … (green). (From Haridas S et al.  Studies in Mycology , 2020.) Using whole genome data from newly sequenced genomes, …

… of Illinois Urbana-Champaign, conducted technoeconomic analysis to determine if this technology might have value in … to make, and it could be sold in the United States for $50-200, generating a potential profit of $1.4 million … U.S. Department of Energy operated under Contract No. DE-AC02-05CH11231. Work at the Molecular Foundry was supported by …

… cells as virocells, a change in name first described in 2011 which reflects the metabolic changes they’ve undergone. … infections can affect the interactions within their ecosystems. Summary Microbes drive the energy and nutrient … was done by the JGI, and proteomics and metabolomics analysis and microscopy at EMSL. The team infected the …

… Many of them spent the summer crunching genomic data at a computer; a few had the opportunity to spend time … Ali, who worked with T.B.K. Reddy on the Genomes OnLine Database; Sarah Fruchart , who worked with Matt Blow; Sean …

… advanced genomic capabilities, large-scale AI-ready data and expertise to the global research community to study complex biological and environmental systems. The foundational studies enabled contribute to the … is also interested in contributing to discussions on JGI data reuse and attribution.  Bonito is an associate …

… how these changes affect the dynamics and functioning of ecosystems. She leads a recently approved CSP New Investigator … or improving bioinformatics tools that can help with dataset analysis, as well as how they can be shared with and used by …

… infect microeukaryote hosts. In doing so, they influence ecosystem-level nutrient cycling and carbon storage. For … approaches. One way of detecting giant viruses in sequence data is read-mapping: using giant virus reference genomes to … reference genome, to sift for snippets of giant viruses in metagenomes. This has been useful in marine environments, …