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Steven Wilson
… Since 2018, Mr. Wilson has served as the Systems Engineering Group … and review, project and work order creation and management, automated sequence quality control and automation of …
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DAS Tool for Genome Reconstruction from Metagenomes
… an integrated approach to genome recovery from metagenomes. The Science Through the JGI’s Emerging … and improved upon a tool that combines existing DNA sequence binning algorithms, allowing them to reconstruct … to demonstrate its capacity to tackle metagenomes with low (40 genomes) to high (596 genomes) complexity. The …
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Polar Phytoplankton Need Zinc to Cope with the Cold
… carbon and nutrients. These microscopic algae have managed to adapt to a unique set of conditions in polar waters, … Science Program (CSP) .  Through this collaboration, in 2017, they published the first genome sequence of a cold-adapted microalga: the diatom …
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High-quality draft genome sequence of Flavobacterium suncheonense GH29-5T (DSM 17707T) isolated from greenhouse soil in South Korea, and emended description of Flavobacterium suncheonense GH29-5T
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Draft genome sequences of Arthrobacter sp. AZCC_0090 and Mycobacterium sp. AZCC_0083 isolated from oligotrophic subsurface forest soil in the Santa Catalina mountains of Southern Arizona
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A One-Stop Shop for Analyzing Algal Genomes
… allows anyone to freely investigate the genes of more than 100 algae. The Science Interested in the genomes of algae? … algal genomes can be incredibly complex and difficult to sequence and understand. A team of researchers led by Algal … Genomes and Microbiomes (IMG/M) system for microbial and metagenome datasets, MycoCosm for comparative analysis of …
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User Executive Committee Charter
… roles. The three Chairs are responsible for preparing the agenda of UEC meetings in coordination with the JGI Director …
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Training the Next Generation of Talent
… which is best for the task at hand. “There are at least 30-40 programs and it is not clear which are the best to use,” …
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Igor Grigoriev
… over 2500 fungal genomes in the JGI MycoCosm portal. In 2018, he launched scale-up of algal geomics and PhycoCosm portal. Dr. Grigoriev engaged thousands of researchers in genome projects and … and lignocellulose degradation encoded in the genome sequence of  Schizophyllum commune . Nat Biotech.  2010; 28: …
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Pinning Down a Piece of Photosynthesis
… of that machine — photosynthesizers’ DNA and RNA. These sequences provide a list of machine parts, and an idea of … crops and creating bioproducts. So Blaby-Haas and her colleague Ian Blaby, a coauthor of the new study, set out to … a similar region —  a domain of unknown function, DUF2470. In the world of proteins, a domain of unknown function …
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Engagement Webinar: How to Successfully Apply for a CSP Proposal
… On September 1, JGI held a JGI Engagement: Pro Tips for Successful … in their proposal as long as they’re staying under the sequence cap? A(nswer): Proposals that are looking at …
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Toward More Reproducible, Reusable Stable Isotope Probing Experiments
… will have heavier DNA or RNA, and SIP techniques leverage this to untangle which microbes ate the compound and how … a  Minimum Information for any Stable Isotope Probing Sequence (MISIP) . They differentiate between required … for a SIP-focused workshop at the JGI in the fall of 2024. “ We wanted to get into the nitty gritty with the people …
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