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JGI@25: Tracking & Subduing the Plague of California’s Oak Woodlands
… challenges.   Scanning the California oak woodlands from the air, large swaths of the bleached, skeletal remains … of these two pathogens, led by the JGI and Virginia Polytechnic Institute State University, was released to the … led the charge to develop rapid diagnoses for SOD. These techniques were also instrumental in tracing the genetic …
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Jeremy Schmutz
… Human Genome Center, now the HudsonAlpha Institute for Biotechnology. There he constructed the pipelines for directed … strategies for de novo sequencing of eukaryotic organisms from simple yeasts to large vertebrate genomes.  For the … enables discovery of agronomically valuable loci. Nature Biotechnology 38:1203-1210. Chen, ZJ et al. 2020. Genomic …
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Promoting the Power of Viral Metagenomics
… DNA or RNA contained in a sample that has been collected from any kind of environment you can think of – animal … represent viruses that were present in the sample. From these data it is possible to answer a wide variety of …
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Adopt-A-Genome
… papers, making the data available for future research. Hear from Rekha Seshadri (JGI) and Matt Escobar (California State …
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Work With the JGI! Tips for a Winning CSP Proposal
… later on in the spring. In this episode, hear proposal tips from Tanja Woyke, who runs user programs at the JGI, and …
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Viruses Reprogram Cells into Different Virocells
… like one, is it still a duck? For a team led by researchers from The Ohio State University and the University of … virocells that are metabolically and functionally different from uninfected cells. Duhaime and Sullivan are … carbon and energy metabolism, to obtain more nutrients from the environment. Demonstrating that the costs of …
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New and Improved: Eucalyptus Reference is Now Accessible
… it separately represents the sets of chromosomes inherited from each parent. It also has 700-fold greater contiguity, … supply wood and fiber for various industrial uses ranging from timber to paper, biomaterials and biorefinery products. … eucalyptus genome assembly generated using advanced technologies to reconstruct the complete sequences of …
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JGI announces final round of 2022 Functional Genomics awardees
… proposals for state-of-the-art functional genomics research from potential users who need help translating genomic …
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MGM Workshop at Fisabio Summer School 2026
… system, presented by Rekha Seshadri and Mateus Fiamenghi from the Microbiome Data Science group. …
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Mike Sneddon
… earned his PhD in Computational Biology and Bioinformatics from Yale University. … of Energy Systems Biology Knowledgebase. Nature Biotechnology 36, 566–569 (2018). Sneddon, MW, Pontius, W, and …
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The Megadata of Lake Mendota - Part 2: Souped Up Computing
… This series is the story of a giant metagenome assembly from Wisconsin’s Lake Mendota. In this episode: a look at …
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JGI Workshop at SIMB NP Meeting
… genomes, and computing resources needed to predict BGCs from available genome sequences. The DOE Joint Genome …
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