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The Facilities Integrating Collaborations for User Science (FICUS) call …

Virophages are small viruses with double-stranded DNA genomes … increased the number of known high quality virophage genome sequences 10-fold through computational approaches. By … they were able to identify 44,221 total virophage partial sequences, including over 28,000 unique MCP sequences.  …

Though visible to the naked eye, microscopy reveals unexpected … kind of discovery opens new questions about bacterial morphotypes that have never been studied before.” Characterizing … the bacterial cells on the molecular level. They amplified, sequenced and assembled the genomes. In parallel, Gros’ lab …

Registration and Agenda Coming Soon!  Hosted by the DOE Joint … metabolic and functional capabilities. Take part in the "Sequences to Cultures" Jamboree!  Immediately following the … Dartmouth University … Metagenomic and single-cell sequence data have provided a means to access novel …

A collaborative team led by Hao Tan from the Sichuan Academy of … M. importuna CCBAS932 from the forests of France, were sequenced and annotated by a collaborative team. The genome sequences and annotations are available on JGI’s fungal …

The Integrative Genomics Building (IGB) seen above is home to … 39,870 projects in FY24 We generated 871 Terabases of sequence We synthesized 9.7 Megabases of DNA We processed … culminated in a reference for the complex  sugarcane genome sequence. The JGI  partnered  with synchrotron user …

Research uncovers the genetic foundations that helped plants conquer land over 600 … Berkeley National Laboratory (Berkeley Lab), scientists sequenced the genomes of four  Zygnematophyceae algae, which … plant resilience and productivity. The algal genomes sequences are available on the JGI’s  PhycoCosm portal. … …

For the first time, a team analyzes the transcriptomes of a lichen fungus … nitrocellulose filters in Petri dishes. The scientists also sequenced the fungus and photobiont’s genomes and compared …

With a new methodology, scientists are now getting more … Amplification to generate enough DNA to put on a sequencer. As previously mentioned, it’s a method that’s … assembly. So while researchers are confident all the DNA sequences came from one cell, including components like …

For the first time in several years, the DOE Joint Genome Institute … mentor Bryce Foster, Benchmarking Bioinformatics Tools for Sequence Similarity Searching Morgan Lavenstein Bendall and … in a model green alga called Chlamydomonas reinhardtii. We’re using an attentive deep learning model called …

Database provides details on river microbes in 90% of US continental watersheds. The … program at Pacific Northwest National Laboratory. The JGI sequenced over 1,000 metagenomes and established …

In late June, Kathleen Lail, a member of JGI’s Sample … samples to the JGI for sequencing.  While JGI processed, sequenced, and analyzed the soil samples, the JGI offered 7 … and Proteobacteria to be the most common phyla of bacteria sequenced from the metagenomic soil samples from the four …