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2024 Progress Report
… 39,870 projects in FY24 We generated 871 Terabases of sequence We synthesized 9.7 Megabases of DNA We processed … culminated in a reference for the complex  sugarcane genome sequence. The JGI  partnered  with synchrotron user … AI clustering algorithms to identify billions of protein sequences in metagenomes.  We continue to engage with our …
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Applying Viral Genomics Expertise to Understanding the Human Virome
… collection of UViGs by identifying contiguous viral sequences (“contigs”) from thousands of ecologically diverse …
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Ancient Algae Reveal Secrets of Plant Evolution
Berkeley National Laboratory (Berkeley Lab), scientists sequenced the genomes of four  Zygnematophyceae algae, which … plant resilience and productivity. The algal genomes sequences are available on the JGI’s  PhycoCosm portal. … …
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An Age of CRAGE: Advances in Rapidly Engineering Non-model Bacteria
… domesticate some 60 strains, inserting into them a genetic sequence that acts as a “landing pad.” Mouncey adds, “Once …
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Making a Lichen Together
… nitrocellulose filters in Petri dishes. The scientists also sequenced the fungus and photobiont’s genomes and compared …
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A Revamped Amplification Method that Enables Nearly Complete Single-Cell Genomes
Amplification to generate enough DNA to put on a sequencer. As previously mentioned, it’s a method that’s … assembly. So while researchers are confident all the DNA sequences came from one cell, including components like …
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Game On: High School Students Drive Everglades Metagenomics Study
… samples to the JGI for sequencing.  While JGI processed, sequenced, and analyzed the soil samples, the JGI offered 7 … and Proteobacteria to be the most common phyla of bacteria sequenced from the metagenomic soil samples from the four … thought that there could be an undiscovered gene that was sequenced in the project to breakdown methane and noted how …
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Researching and Solving Real-World Problems with the 2023 JGI-UC Merced Interns
… mentor Bryce Foster, Benchmarking Bioinformatics Tools for Sequence Similarity Searching Morgan Lavenstein Bendall and …
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Cataloging the Microbes that Manage the Health of River Systems
… program at Pacific Northwest National Laboratory. The JGI sequenced over 1,000 metagenomes and established …
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Ray Turner Completes Last Tour of Lab Duty at JGI
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Tracking the Origins of Methane-Producing Microbes
… the microbes into small pools of cells that were then sequenced separately. From these samples, 111 …
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Methane Makers in Yosemite’s Lakes
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