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A Better Way to Find RNA Virus Needles in the Proverbial Database Haystacks
… Tel Aviv University in Israel, the National Center for Biotechnology Information, and the U.S. Department of Energy … data sets of RNA sequences (metatranscriptomes) generated from diverse environmental samples around the world, … the paper, of the uncovered viral diversity. “Although the technical challenges of data analysis at this scale are …
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Genome organization of the vg1 and nodal3 gene clusters in the allotetraploid frog Xenopus laevis
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Ray Turner Completes Last Tour of Lab Duty at JGI
… a close as this previously retired Naval Commander retires from Berkeley Lab. For the last 15 years, Ray Turner has … a close as this previously retired Naval Commander retires from Berkeley Lab. On June 24, in what was billed as a … while working to accommodate major changes in the technology implementation. As the JGI’s Walnut Creek …
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Fishing for Novel Cellulose Degraders
… the bait designed to attract specific catches. A similar technique has been developed by researchers led by Tanja … When they tested the screen method on a microbial community from geothermal hot springs, they uncovered a novel … uncover more about cellulose-degrading microbes. The new technique is another tool for microbial ecologists to learn …
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Six join FICUS program in 2026
… user facilities. Focus areas for these projects include biofuels, biomaterials and bioproducts; … interactions; and novel applications of molecular techniques. The FICUS program is designed to encourage and …
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JGI Welcomes New UEC Members
… and practices that affect users and their access to technical capabilities JGI offers, as well as proposal …
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JGI Contributes Nine to 2022 Highly Cited Researchers List
… Congratulations to the  2022 Highly Cited Researchers from the JGI recognized for their “significant influence in … during the last decade” by Clarivate Analytics. Those from the JGI whose publications rank in the top 1% by … is sequencing thousands of bacterial and archaeal genomes from diverse branches of the Tree of Life.  Its latest …
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Nandita Nath
… in developing new methods to improve genome recovery from single cells and to build sequencing libraries from minimal DNA input without amplification. …
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An Earth Month Look at Sustainability Efforts at the JGI
… And so we’re looking at the overall greenhouse gas impacts from all of our operations,” said Brie Fulton, program … Reaching that goal will mean slashing direct emissions from energy, natural gas and electricity, as well as … and performing services,” Fulton said. These emissions come from the whole lifecycle of materials used — from their …
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JGI@25: A Single Cell, Myriad Microbial Discoveries
… the Bigelow Laboratory for Ocean Sciences described a novel technique to access high-quality genomic information using minute quantities of DNA derived from individual environmental cells. The proof of principle … team reported the first closed and finished genome derived from an uncultured bacterial single cell – a symbiont of the …
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The Expanding Universe of Methane Metabolisms in Archaea
… provided by the other study co-authors, and reconstructed from these 10 metagenome-assembled genomes (MAGs) … because the database already contains metagenome datasets from a variety of environments, as well as tools for … Of the 10 MAGs reconstructed in the study, five were from undersampled or previously undescribed lineages, and …
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“A STEM career is in reach and accessible”
… Notes from the Summer 2018 Biotech Partners Interns from Antioch High School. Though a partnership with Biotech Partners, a nonprofit that provides underserved youth …
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