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… seen above is home to the DOE Joint Genome Institute (JGI). Researchers from the DOE Systems Biology Knowledgebase (KBase), the National Microbiome Data Collaborative (NMDC), and Berkeley Lab Biosciences Area … Genome Institute has continued its journey to realize our new vision to, “ Lead genomic innovation for a sustainable …

… of rapidly growing plants whose biomass can be renewably converted into energy or biofuels. Although a member … Center for Biotechnology. Most plants are diploids with two copies of each chromosome, one inherited from each … to novel traits. M. sinensis is a tetraploid, with four sets of chromosomes; the study showed that these sets …

… of samples for sequencing, or the submission of sequencing data for synthesis – the DOE requires that all work … Nancy Hammon Workflow Planning Manager Miranda Harmon-Smith DNA Synthesis and Single-Cell Genomics Vivian Ng Fungal …

… In complement to the Community Science Program, JGI researchers drive innovations that cross the boundaries of … Metagenome, Metabolomics, Secondary Metabolites, and DNA Synthesis Science Programs and draw from the infrastructure of Genomic Technologies and Data Science & Informatics. The JGI also sustains a vibrant …

… researchers searching for sequences of RNA viruses in large data sets, their work may be akin to finding a single snowflake … higher-level classifications of virus groups (phyla.) The new sequences are filling in some gaps on existing virus … integrated high-throughput sequencing and computational analysis that enable systems-based scientific approaches to …

… gene clusters (BGCs.) As reported in the recent Database issue of the journal Nucleic Acids Research , … come pre-annotated using multiple commonly used sequence analysis tools is a means of expediting BGC and biosynthesis … data.   The SMC ( smc.jgi.doe.gov ) is designed with two main objectives. First and foremost, it is a BGC …

… provide advanced genomic capabilities, large-scale AI-ready data and professional expertise to support the global … this mission by enabling large-scale genomic discoveries, data integration, and AI-driven analyses that convert …

… a vast range of organisms and ecosystems. These kinds of data could open opportunities along multiple avenues, … vision, an updated mission statement for the user facility sets out to support the global research community with … strategic plan, the JGI accomplished 90% completion of the two- and five-year milestones. “We will continue to be a …

… New Lineages of Life (NeLLi) Symposium … represented at conferences year round; find out where our researchers will be presenting next. Go here to learn about …

… for the bioeconomy.   The Science Researchers report a new reference genome for eucalyptus in the July edition of … both haplotypes, meaning it separately represents the sets of chromosomes inherited from each parent. It also has … annotation completement level of 99.4%.  In comparing the two assemblies, the researchers also noticed that the 2025 …

… the services of the Arizona Genomics Institute for DNA and RNA extractions to support plant and other efforts. … Energy Research Scientific Computing Center (NERSC) and data infrastructure projects—the DOE Systems Biology … Data Collaborative (NMDC)—to provide access to datasets, workflows, and tools to seamlessly expand data …

… microbial communities could lead to the development of new biotechnologies around clean energy,  biofuels and … and metabolic potential of the communities studied. The datasets are available on the JGI’s  Integrated Microbial … funded by the US-National Science Foundation grants OCE-0728391, OCE-0937404, OCE-1558795 to A-L.R, and OCE-2049478 …