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Plotting a Model for Virus-Host Warfare Deep Below Ground
… ecosystem. The Science Altiarchaea are carbon-fixing microbes and targets of multiple viruses in Earth’s deep subsurface. They are abundant … are using Altiarchaea as a model system to study virus-host interactions. Approximately 150 archaeal viruses had been …
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JGI@25: Fueling Investigation into Methane-Making Microbes
In honor of the JGI's 25th anniversary in 2022, we have revisited a … come from livestock — specifically, from the methane-making microbes within their rumen. There is another climate-minded … of rumen microbes. In 2018, through a JGI Community Science Program proposal that started six years earlier, researchers …
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Natural Prodcast Episode 9: Roger Linington
… … DAN: Welcome back for episode 9 of Natural Prodcast. This week, Alison and I talk to Roger … University in British Columbia, Canada. This is the last of the podcasts we recorded in my hotel room at SIMB, or the … research in Panama through support from the ICBG training program, which stands for International Cooperative …
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JGI Portals
… constant developments to meet the ever-changing demands of our users. … Download plant, algal, fungal and microbial … new data for use by scientists and the public, and provide programmatic access to all sequence and annotation data and … — Plasmid Resources … Integrated Microbial Genomes — Virus Resources … Mycocosm … Phycocosm … Phytozome … …
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How Microbes Can Protect Plants in Drier Straits
A mini-episode looking at the efforts of Pankaj Trivedi, whose New Investigator proposal was recently approved through the JGI Community Science Program, to use microbiome science to help make plants more …
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Cataloging the Microbes that Manage the Health of River Systems
Database provides details on river microbes in 90% of US continental watersheds. The Science In a recent Nature … are transport systems, and their health is heavily reliant on the energy and nutrient flows that the microbes in …
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Giant virus diversity and host interactions through global metagenomics
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FICUS Overview
… to more easily integrate the expertise and capabilities of multiple Department of Energy Office of Science National User Facilities into … of Work document. … What happens after I submit? … User Programs …
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Natural Prodcast Episode 2: The Primer, Part 2
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … we really recognize, right?  ALISON: And I tend to think of microbes as being able to secrete a lot more things than … also suddenly useless. ALISON: I got it. Okay. Yeah. Smart microbes. I know they’re not actually smart. That’s …
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Publication Policy
… (see Auspice Statement below) for the generation of sequence or metabolomic data, DNA synthesized, and any … as assembly, analysis, annotation, verification, creation of genome browsers, etc. The users, collaborators and JGI … Collaborations for User Science” (FICUS) JGI-EMSL program should contain the following Auspice Statement in …
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A Natural Mechanism Can Turbocharge Viral Evolution
Understanding how a fundamental mechanism of evolution allows microbes to adapt to changing environments. The Science The first step in the deadly dance between a virus and microbial cell is an embrace. For a virus with a …
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Viruses interact with hosts that span distantly related microbial domains in dense hydrothermal mats
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