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Mining Public Databases Yields Largest Map of Fungal Mitochondrial Genomes to Date
… By leveraging new tools and large-scale data mining, JGI researchers nearly tripled the available fungal mitochondrial genome data, unlocking new potential for AI-driven studies … — the DNA found inside mitochondria, the energy-producing structures within cells. This is the largest dataset of its …
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Scaling Up Existing Skill Sets
… industry. I really liked the fairly flat organizational structure, and found everyone to be welcoming and helpful. … was an opportunity to adapt my existing skill set to a new scale, which presented a host of interesting and ultimately … Year: 3rd year undergraduate student Mentor: Zhong Wang, Genome Analysis What effect has your summer internship with …
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Scaling metagenome sequence assembly with probabilistic de Bruijn graphs
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Comparative genomics reveals mobile pathogenicity chromosomes in Fusarium
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Genetic Analysis of Physcomitrella patens Identifies ABSCISIC ACID NON-RESPONSIVE, a Regulator of ABA Responses Unique to Basal Land Plants and Required for Desiccation Tolerance
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Natural Prodcast Episode 2: The Primer, Part 2
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the … metabolism is based on primary metabolism. It’s an evolution of primary metabolism. So a lot of the genes and … from polyketides. At least I mean, I haven’t looked at the structures and details for a long time. But… DAN: Yeah, …
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Soil pH influences the structure of virus communities at local and global scales
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Project Management Office
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New and Improved: Eucalyptus Reference is Now Accessible
… An improved genome assembly to support targeted tree breeding for the … haplotypes, meaning it separately represents the sets of chromosomes inherited from each parent. It also has 700-fold … to reconstruct the complete sequences of individual chromosomes. The team describes the latest eucalyptus …
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The Chlamydomonas Genome Project, version 6: reference assemblies for mating type plus and minus strains reveal extensive structural mutation in the laboratory.
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User Support
… access your data, share with collaborators, and coordinate publication with JGI scientists. Synthetic DNA constructs …
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JGI Announces FY26 Large Scale Portfolio for Our Community Science Program
… selected for our 2026 Community Science Program Large Scale call. This portfolio accelerates bioenergy innovation … open metagenomics data. Taking the JGI’s call for large-scale projects at their word, the research consortium aims … they embark on ambitious projects that span disciplines and scales,” said Tanja Woyke , the JGI’s User Programs Deputy. …
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