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Webinar: MycoCosm Tutorial
… potential to create new EcoGroups – reach out to us. 3.  Q: Can you use NCBI taxonomy information to search your … While are still working on finalizing the tree and related publication the tree is still in development and not … and then submit metadata and assembly at  https://gold.jgi.doe.gov 10.  Q: Is there any possibility to search …
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Alabama Agricultural & Mechanical University Internship Program
… a year of firsts, including the flagship internship program between Alabama Agricultural & Mechanical University and the Joint Genome Institute. AAMU students spent two months in … Our interns say their experiences allowed them to:  Learn new skills. Experience industry-level work and coding. …
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Mapping Heat Resistance in Yeasts
… A new approach for improving functional annotation in fungal … that a new genetic mapping strategy called RH-Seq can identify genes that promote heat resistance in the … Saccharomyces cerevisiae , allowing this species to grow better than its closest relative S. paradoxus at high …
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A Revamped Amplification Method that Enables Nearly Complete Single-Cell Genomes
… With a new methodology, scientists are now getting more complete … in the lab. To access the genomes of uncultured  microbes , scientists usually employ two different methods; … studied with MDA. With the introduction of PTA, JGI users can get more complete single-cell genomes more consistently. …
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Mapping the Earth’s Hidden Fungal Kingdom
… evolving for 82 million years, making it nearly 30 times older than the entire human lineage. Yet despite their … Earth's fungal kingdom. The manuscript reviews about 200 publications linking evolutionary history and innovations … Berkeley National Laboratory (Berkeley Lab). “These data can also be used for machine learning and artificial …
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A Sorghum Pangenome Opens More Doors to Discovery
… powerhouse thrive. Within its genome, Sorghum bicolor holds keys to drought and flood resilience, biomass … view than ever before. With this information, researchers can link genetic variation more closely with gene function … Development (USAID) also supported the work.   Publication:  Morris, G.P., Harder, A.M., Healey, A.L.  et …
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A Natural Mechanism Can Turbocharge Viral Evolution
… how a fundamental mechanism of evolution allows microbes to adapt to changing environments. The Science The first … diversity quickly, allowing these viruses to target new microbial prey. The Impact This research provides a much … discovery of more than 30,000 DGRs in this analysis, a 20-fold increase over what was previously known, throws open the …
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Engagement Webinar: What Can You Do With An Approved CSP Functional Genomics Call Proposal?
… is open year-round, but proposals submitted by July 30 will be included in the next review. “So webinars like this … looked at how different bioenergy relevant plants can produce species-specific blends of terpenoids, naturally … is submitted to the JGI, JGI scientists will go over the whole proposal for the technical feasibility first. …
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CSP Large Scale Call
… relevance to DOE’s Biological and Environmental Research (BER) program missions .  While applications will be accepted … DOE mission relevance, proposed data usage by the applicant/community, and track record of the applicant. For accepted proposals, sequencing, synthesis, metabolomics and analysis will be …
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Eelgrass Proves to Be Much Younger Than We Thought
… Recent study shows eelgrass has been around about 2.5 million years less than previously … a changing climate. Knowing more about how eelgrass evolved can help inform conservation efforts for at-risk … doubling all of its chromosomes.  Over time, the new and old chromosome copies begin to diverge and mutate relative …
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A chromosome-level genome assembly of the varied leaved jewelflower, Streptanthus diversifolius, reveals a recent whole genome duplication
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Shattering Expectations: Novel Seed Dispersal Gene Found in Green Millet
… in wild populations for the first time. For years, Elizabeth (Toby) Kellogg and other researchers at the Danforth … plants thrive in warm, arid environments. Corn and sugarcane are among the major high-yield C4 crops, as are the … it was involved in shattering by turning it off. “It’s a new shattering gene variant identified in a natural …
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