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A Collaboration to Improve Plant Genome Annotations Across Species
… which specializes in genome improvement for plants. As part of that partnership, the JGI and HudsonAlpha researchers led … the complete set of RNA molecules transcribed from all the genes within a cell or tissue at a specific time or under … plant species. It was developed to improve plant genome annotations at the US Department of Energy (DOE) Joint …
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Plant-Microbial Interactions Group
… are complex organisms that harbor a fantastic diversity of cell types and associated organisms, including fungal and … simiae WCS417. One suggested function of these phage genes is the modulation of their bacterial host to colonize … of plant/environmental responses … Selected Publications … Research Team Alumni … For further details, …
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Data Ecosystem
… cohesive data standards, the JGI partners with a number of facilities.  … Through its partnership with NERSC and the … such as metabolic modeling, that go well beyond genome annotation and analysis. The JGI and KBase seek to enable … access and analyze data on scales ranging from single genes and individual genomes to metagenomes to systems-level …
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Functional autonomy of distant-acting human enhancers
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Beyond the census of human gut dwellers
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Metagenomic compendium of 189,680 DNA viruses from the human gut microbiome
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Full Genome of Phialocephala scopiformis DAOMC 229536, a Fungal Endophyte of Spruce Producing the Potent Anti-Insectan Compound Rugulosin
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Supporting community annotation and user collaboration in the integrated microbial genomes (IMG) system
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A Catalog of Reference Genomes from the Human Microbiome
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Structure, function and diversity of the healthy human microbiome
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A thermostable Cas9 with increased lifetime in human plasma
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Virus-associated organosulfur metabolism in human and environmental systems
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