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Data Ecosystem
… access to diverse datasets that deepen our understanding of how organisms interact with each other and with their … we build far-reaching communities of researchers to bring down barriers to productivity.   … Through its partnership with NERSC and the DOE Energy Sciences Network (ESNet), the JGI has unique …
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Partnerships: Myco-Ed
… species.  Students collect fungi, sterilize tissue, isolate genes and more. The metadata then goes into iNaturalist. … to biological inference and understanding of fungal diversity, ecology, and potential applications. … KBase integrates a variety of data and analysis tools, from DOE and public resources, into an easy-to-use platform that …
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Biodesign
… Platform capabilities support researchers exploring how to convert sequence into functional assessments. This is done by synthesizing genes, pathways, and whole chromosomes for bioenergy, …
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CalTeach
… focuses on STEM pedagogy, educational theory and promoting diversity, equity, and inclusion, with concurrent …
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Global metagenomic survey reveals a new bacterial candidate phylum in geothermal springs
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CSP Large Scale Call
… biology, modeling and biodesign — questions of relevance to DOE’s Biological and Environmental Research (BER) program … emphasis that are listed in the call and leverage the diversity of JGI technical and analytical capabilities. All … will be externally peer-reviewed for scientific merit, DOE mission relevance, proposed data usage by the …
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Taking Stock of the Known and Unknown Microbial Space
… Advances , researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science … into over 1.8 million bacterial and archaeal genomes to see how much of their diversity we've actually captured,” said … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility located at Lawrence …
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Bacteria and Fungi Divvy Up the Work in Forest Floor
… second fiddle to those from fungi when it comes to breaking down tough plant fibers. The Science Walk in a temperate … division of labor between the two groups. Fungi are much more active in degrading plant matter, and bacteria are … down and away from the roots one goes, the more bacteria show up. The data underscore what was already suspected: …
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Yeasts and how they came to be
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Who We Are
…   The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is a national user … and collaboration with partner organizations such as the DOE Systems Biology Knowledgebase and the National … The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is a high-throughput …
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A Sorghum Pangenome Opens More Doors to Discovery
… into drought tolerance, biomass production and more — however, a single reference genome shows only one slice of … possible for this plant. In other lines around the world, much more genetic diversity exists.  Now, researchers have … Development (USAID) also supported the work.   Publication:  Morris, G.P., Harder, A.M., Healey, A.L.  et …
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Learning to Look
… inovirus diversity. To answer the question, “Where’s Waldo?” readers need to look for a number of distinguishing … metagenomes mined for this study. “We’re simply getting much better at seeing them, which means we can now study … replication and integration. The researchers also learned how an inovirus’ strategy of integrating itself within a …
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