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University of California, Merced Internship Program
Originally conceived as a UC Merced graduate student summer research experience at the JGI, the Genomics Internship Program soon expanded to include … To date, more than 80 UC Merced students have contributed to the research of numerous JGI scientists. Interns …
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Single-cell genomics reveals features of a Colwellia species that was dominant during the Deepwater Horizon oil spill
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Comparative genomic analysis reveals evidence of two novel Vibrio species closely related to V. cholerae
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Publication Policy
The JGI has a strong interest in seeing that the data produced by the facility … acknowledgment (see Auspice Statement below) for the generation of sequence or metabolomic data, DNA synthesized, … interpretation of sequence, metabolomics, and functional genomics data types as well as in advanced assembly and …
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Applying Viral Genomics Expertise to Understanding the Human Virome
… tools and data hub for NIH program. While the microbes in, on and around Earth outnumber the stars in the Milky … in developing and maintaining the JGI’s  Integrated Microbial Genomics and Microbiomes (IMG/M) system. The … to easily analyze viral genomes. This includes (i) classifying viruses into groups that can be compared across …
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Natural Prodcast Episode 22: Alison Narayan
Hey everyone. Welcome back to Natural Prodcast. This continues the series of interviews we recorded at the Society … you want it to have some promiscuity in the substrates it operates on. DAN UDWARY: Got it, OK, OK. JACKIE WINTER: So … tube, like a 50 mil Falcon tube, that visually looks like a piece of candy corn. Right? It’s like colorless– DAN UDWARY: …
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Nikos Kyrpides
Dr. Kyrpides joined the DOE Joint Genome Institute in 2004 to lead the … the development of the comparative analysis platforms for microbial genomes and metagenomes (IMG). He became the Metagenomics Program head in 2010 and has the combined Microbial …
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Experimental factors affecting PCR-based estimates of microbial species richness and evenness
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Partners
The JGI leverages its existing partnerships and develops others … and is further leveraging the services of the Arizona Genomics Institute for DNA and RNA extractions to support …
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JGI@25: A Single Cell, Myriad Microbial Discoveries
In honor of the JGI's 25th anniversary in 2022, we have … and offered a way for researchers to study the planet’s microbial diversity, much of which remains unknown and … in carbon fixation in the dark ocean. Combining single cell genomics and synthetic biology, a team studying microbial …
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Frederik Schulz
Dr. Frederik Schulz joined the DOE Joint Genome Institute in 2016 and is leading … sequence data. Dr. Schulz employs multi-omics (metagenomics, metatranscriptomics, single cell genomics and … user community and supports various user projects in the Microbial Program. In an LDRD-funded project, Dr. Schulz …
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Shattering Expectations: Novel Seed Dispersal Gene Found in Green Millet
Survey of Setaria's natural diversity reveals seed dispersal in wild populations for the first time. For years, Elizabeth … Kellogg added, and shattering genes may be specific to species or groups of species.  The genome data also revealed that green millet was introduced into the United …
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