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… we mark both the 50th celebration of Earth Day on April 22, and DNA Day on April 25. As both Earth and DNA are close … occur in April: the 50th celebration of Earth Day on April 22, and DNA Day on April 25. Since both DNA and the Earth …

… applying a method that allows researchers to quickly modify diverse bacterial genomes. In 2019, the JGI’s Yasuo Yoshikuni and his team  announced in  … precise genome editing. This means that scientists can modify gene expression, or delete genes, all with the rapid …

… as the interim deputy for JGI User Programs. Earlier this year, she was elected to the American Academy of …

… fungi.  Nature Microbiol. 8(4):596-610. Nelson et al (2022) Wildfire-dependent changes in soil microbiome diversity … of natural products. Proc Natl Acad Sci U S A. 118(18):e2019855118. Miyauchi et al (2020) Large-scale genome … traits. Nature Commun . 11(1):5125. Krizsán et al (2019) Transcriptomic atlas of mushroom development reveals …

CRAGE-CRISPR combo helps further demystify biosynthetic gene clusters.  The Science Microbial … in overcoming this obstacle when it hit the scene in 2019. Now, that power is poised to grow exponentially by … pairing proved to rapidly confirm enhanced production of 22 metabolites from six biosynthetic gene clusters. One of …

Progress Reports from the Joint Genome Institute.  … FY20 Progress Report … FY19 Progress Report … FY18 Progress Report … FY17 Progress Report … FY16 Progress …

… system. We seek to expand beyond this model system by identifying phages and characterizing this multipartite phenomenon … 10.1016/j.celrep.2023.112676 10.1016/j.devcel.2022.01.008 10.1038/s42003-021-02477-4 … 10.1073/pnas.1907500116 10.1016/j.celrep.2019.04.054 10.1371/journal.pbio.2002860 … Postdocs: Margot …

… the JGI in 2014 to develop the metabolomics program, and in 2019 became Platform Lead where she manages metabolomics … analysis pipelines.  Beyond profiling over 10k samples/year, Dr. Louie and her team work with other JGI scientists … to assess metabolite turnover, DNA-SIP for helping identify active micro-organisms within complex communities, and …

Cells bioRxiv , 2024.01. 30.577819 2. Dicenzo et al. 2022. DNA Methylation in  Ensifer Species during Free-Living … regulation. Nature methods 18 (12), 1499-1505 Shulse et al. 2019. Engineered Root Bacteria Release Plant-Available … 2016. The Epigenomic Landscape of Prokaryotes. PLoS Genet 122:e1005854. Nord Et Al. 2013. Rapid and Pervasive Turnover …