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JGI@25: A Single Cell, Myriad Microbial Discoveries
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number … and offered a way for researchers to study the planet’s microbial diversity, much of which remains unknown and … genomics have afforded JGI users and the larger research community a means to access microbial lineages from a …
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FICUS-NERSC/KBASE
… of the Joint Genome Institute is to serve the scientific community as a user facility pioneering functional genomics … expand upon highly successful past collaborations, the DOE JGI, NERSC and KBase issued a call for proposals in … as part of the FICUS initiative. Proposals submitted to the JGI-NERSC-KBase call do not use the Letter of Intent; rather …
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JGI@25: From Life at the Extremes to Editing Genomes
… Science group led by Nikos Kyrpides , mining the Integrated Microbial Genomics & Microbiomes (IMG/M) system’s immense … discovery of miniature CRISPR-associated proteins that can target single-stranded DNA. Such proteins have been adapted … doi: 10.1038/s41467-017-01408-4. Tyson GW et al. Community structure and metabolism through reconstruction of …
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JGI Announces 2023 Community Science Program Awardees
… to the proposers of the 19 proposals selected for the 2023 Community Science Program call of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … CSP recipients, over half of which are first-time PIs on a JGI proposal,” said Tanja Woyke , JGI’s deputy of User …
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DNA Synthesis Program
… The JGI’s DNA Synthesis Program supports a wide range of … The JGI's DNA Synthesis Science Group supports researchers … The JGI has developed a suite of build-optimization software … The IMG/M system serves as a community resource for comparative analysis and annotation …
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JGI Announces FY26 Large Scale Portfolio for Our Community Science Program
… Lauren Stadler, Tingting Xiang and Sheree Yao. ] ] The JGI welcomed 14 scientists selected for our 2026 Community Science Program Large Scale call. This portfolio … and developing RNA barcoding systems to optimize microbial bioreactors. This genomic research creates new …
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Operating Expenses
… FY2025 Spending Profile The JGI is funded primarily by the DOE Office of Biological and Environmental Research (BER), a program within the DOE Office of Science. …
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A single-cell genomics pipeline for environmental microbial eukaryotes
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JGI@25: Expanding Metagenomics to Capture Viral Diversity
… because they often need unique conditions and a specific microbial host to replicate. Sequencing genetic material … genomes, JGI researcher Antonio Camargo developed a new pipeline for identifying viruses across many thousands of … “If you want to do anything with a microbiome — you know, target specific microbes or change the behavior of this …
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2021 JGI Proposal Call Brings New Investigators into Community Science Program
… Accepted proposals emphasize JGI interests in algae and secondary metabolites. A total of 27 proposals have been  approved through the annual  Community Science Program (CSP) call of the U.S. Department … The work builds upon a pilot project to sequence antimicrobial-producing strains. Established by Handelsman, Tiny …
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JGI@25: Using Team Science to Build Communities Around Data
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number … the 1000 Fungal Genomes (1KFG) Project through a 2012 Community Science Program proposal. Joseph Spatafora of … The Open Green Genomes Initiative is the product of a 2018 Community Science Program proposal from James Leebens-Mack …
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Transitions of foliar mycobiota community and transcriptome in response to pathogenic conifer needle interactions
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