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From Competition to Cooperation
… lineages. The Science By comparing 135 fungal sequenced genomes, researchers were able to carry out a broader … lineages. To learn why, researchers analyzed 135 fungal genomes representing major fungal families, including those for which there were previously no genomes of symbiotic species available: 73 saprotrophs and …
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Webinar: PhycoCosm Tutorial
… data portal , an interactive collection of sequenced algal genomes, omics data and comparative analysis tools. … for the answer provided by Sara 4.  Q(uestion): Are all CSP produced data automatically assembled and run through … on the synteny page. 7.  Q: What is the success rate for CSP? What makes a successful CSP? A: Reminder: two calls for …
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Assembly of 500,000 inter-specific catfish expressed sequence tags and large scale gene-associated marker development for whole genome association studies
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Genome-scale metabolic rewiring improves titers rates and yields of the non-native product indigoidine at scale
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Virus diversity and activity is driven by snowmelt and host dynamics in a high-altitude watershed soil ecosystem
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JGI announces 2025 Functional Genomics awardees
… genomic information into biological function. Through our  CSP Functional Genomics call , we look for projects that … and omics capabilities to enhance understanding of gene and genome function. Tapping into these functions allows …
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Partnerships: Myco-Ed
… genomic resources empower students through isolation and genome sequencing of new fungal species.  Students collect … Myco-Ed has:  ~50 lineages selected for sequencing 16 genomes released 20 members from 15 institutions 300+ … solution for production of high-quality fungal reference genomes, this program is an important initiative that …
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Jeremy Schmutz
… back to 1997, when he was working for the Stanford Human Genome Center, now the HudsonAlpha Institute for … 5, 16, and 19. Following the completion of the Human Genome Project in 2003, he developed sequencing, assembly, … Institute and the collaborative projects funded through the CSP program. In addition to continuing to develop strategies …
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JGI Scientists Pen Genome Watch Articles
… Researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … the  Nature   Reviews column all started with an email in 2018.  Tanja Woyke , who leads the  Microbial Program at the … Woyke was invited to present her work in London in December 2018 at a Symposium at the Royal Society. The editors at the …
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Consensus statement from the first RdRp Summit: advancing RNA virus discovery at scale across communities
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A Community Resource for Secondary Metabolite Researchers
… over 1.3 million publicly available bacterial and archaeal genome and contig sources.  The Impact Secondary metabolites … or tools. The U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … metabolites portal within the Integrated Microbial Genomes and Microbiomes (IMG/M) system known as IMG-ABC. …
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Nigel Mouncey
… Dr. Mouncey joined the DOE Joint Genome Institute in 2017 as the fourth Director in its … to build and position JGI as a leading integrative genome science user facility.  In addition to serving as JGI … DOE National Laboratories, the Community Science Program (CSP), and external collaborations. The Director ensures the …
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