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Jeremy Schmutz
… 19. Following the completion of the Human Genome Project in 2003, he developed sequencing, assembly, and improvement … Institute and the collaborative projects funded through the CSP program. In addition to continuing to develop strategies … Healey, A.L., Garsmeur, O., Lovell, J.T. et al.  2024.The complex polyploid genome architecture of sugarcane. …
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An Age of CRAGE: Advances in Rapidly Engineering Non-model Bacteria
… researchers to quickly modify diverse bacterial genomes. In 2019, the JGI’s Yasuo Yoshikuni and his team  announced in  … bacterial strains as part of the Community Science Program (CSP)  Functional Genomics proposal call. …
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Marchantia Pangenome Highlights Adaptive Nature of Plant Lineages
… Research Council under the European Union’s Horizon 2020 research and innovation program (grant agreement no. 101001675-ORIGINS) and from the FRM/FSER (FRM/FSER202302017064) to P.-M.D., from the CNRS to P.-M.D. and H.P. …
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Clustering Categorical Data
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2025 NeLLi Symposium
… Nevada, Las Vegas, and the Desert Research Institute, the 2025 NeLLi Symposium delves into the most recent expansions … is a continuation of the previous NeLLi Symposia. In this 2025 Symposium, we will showcase the latest research on the … than Las Vegas. Participants will be required to pay up to $20 cash to cover transportation and a box lunch. …
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Better Genome Editing for Bioenergy
… CRISPR-Cas9 relies on RNA with a short guiding sequence (20 bp) that directs the endonuclease where to cut, but these … This work was supported by DOE Joint Genome Institute grant  CSP-503076 (IW, HA, and MB) and NSF  1706545 (IW). HA and JW …
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A More Intuitive Phytozome Interface
… version of the JGI’s plant data portal. On August 6, 2021,  version 12 of Phytozome will be retired, and  version … over 5 years, provides users with the genome browsers, gene pages, search, BLAST and BioMart data warehouse interfaces … v12 links (e.g., to gene reports and organism information pages) will be seamlessly forwarded to Phytozome v13. Below …
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Annual Meeting 2027
…   Save the Date: March 16–18, 2027 The next JGI Annual Meeting will be held in March 2027 at the Oakland Convention Center. Check this page as further details become available. Sign up for our …
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JGI Announces 2023 Community Science Program Awardees
… to the proposers of the 19 proposals selected for the 2023 Community Science Program call of the U.S. Department … very excited to start working with this years’ crop of CSP recipients, over half of which are first-time PIs on a … and we look forward to facilitating their success. “ The CSP Annual Call is focused on large-scale genomic science …
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Ancient Algae Reveal Secrets of Plant Evolution
… three strains of  Zygnema circumcarinatum . Published  May 2024 in  Nature Genetics by an international research … the Joint Genome Institute Community Science Program (CSP), the United States Department of Agriculture (USDA) … Council for funding under the European Union’s Horizon 2020 research and innovation program (grant agreement no. …
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From Competition to Cooperation
… the framework of the Mycorrhizal Genomics Initiative (CSP # 305), Metatranscriptomics of Forest Soil Ecosystems project (CSP # 570) and the 1000 Fungal Genome projects (CSP # 662 & … Program of the Hungarian Academy of Sciences (Grant No. LP2019/13-2019) and the National Research, Development and …
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Graduate Students Get Thesis Research Opportunity at the JGI
… of the latest SCGSR award is Mo Kaze, part of the 2018 cohort of the JGI-UC Merced Genomics Internship … microbiomes. Tringe was also Kaze’s mentor during her 2018 internship, in which she explored anthropogenic impacts … samples across spatial and temporal scales. Rambo also plans to work with JGI virus researchers and harness the …
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