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Secrets of the Needles: What Microbes do on Conifer Leaves
… From our partners …
Learn more
When “The Blob” Made It Hotter Under the Water
… Data from marine heatwave event may foreshadow climate change … in the ocean drive the biological pump that takes carbon from the atmosphere and keeps it in the deep ocean. With … P transect, a series of geographic coordinates which go from coastal to open ocean waters. Between 2010 and 2016, …
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A Revamped Amplification Method that Enables Nearly Complete Single-Cell Genomes
… scientists are now getting more complete genomic results from single cells. The Science Studying the  genomes of … Summary The two most common methods for collecting genomes from microorganisms are shotgun (group) metagenomic … than its single-cell counterpart. In this approach, DNA from all the different species is mixed together and …
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JGI@25: Fueling Investigation into Methane-Making Microbes
… one-third of human-created methane emissions actually come from livestock — specifically, from the methane-making … methane-emissions as well as efficient engineering of biofuels. Since 2010, the JGI has partnered with researchers … collection to identify microbial markers that would allow farmers to screen livestock, and breed low-methane producing …
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JGI Accepts 17 Proposals for Community Science Program
… (Berkeley Lab). They were selected through peer review from 41 full proposals out of 50 letters of intent … harnessing genomics to developing sustainable resources for biofuels and bioproducts. Andrew Nelson of the Boyce … in the Antarctic Peninsula. Additionally, the proposal from Viola Krukenberg at Montana State University …
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Complete Genome of Oil-Rich Alga Reveals Ideal Platform for Bioengineering
… to photosynthesize, it can function as a self-sufficient biotechnology. Overall, this work supports the mission of the … of genome biology, and develop genome-scale engineering technologies to control plants and microbes for bioproducts … that could be useful for protein production and other biotech applications. Engineers could manipulate these natural …
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JGI Early Career Researchers Featured in mSystems Special Issue
… small pools before sequencing to recover rare microbes. The technique was applied to a recent Nature Communications … specific metabolic processes. A third approach steps away from reconstructing genomes directly from the environment and focuses on sequence reads to link …
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Charting Progress toward Professional Goals
… Select interns look back on meaningful lessons from their summer experiences at the JGI Berkeley Lab offers … build skills and tools, they gain invaluable scientific and technical experiences.  Genomic data scientist Deanna Beatty … in the SEED Scholars @ LBNL program,  with support from  the SEED program at UC Berkeley. Sally Liao came in …
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Ancient Algae Reveal Secrets of Plant Evolution
… enhanced our understanding of how early plants transitioned from water to land. Key gene groups involved in stress … land for biomass production — that can be converted into biofuels and bioproducts — would further drive a strong … of four  Zygnematophyceae algae, which were isolated from diverse freshwater environments. Arising in tandem from …
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John Vogel
… (e.g. sequenced mutant collections, transformation technology, epigenetic analysis techniques) and utilizing these resources to understand … 2019 Transcriptomic analysis of field-droughted sorghum from seedling to maturity reveals biotic and metabolic …
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JGI@25: Mapping Switchgrass Traits with Common Gardens
… of biomass which could then be converted into sustainable biofuels . For its importance to the DOE mission, … miles and eight states. In 2021, using switchgrass samples from these gardens, a team led by researchers at the … genome built off more than a decade of work; as sequencing technologies advanced, assembly and annotation of the genome …
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… carbon and nitrogen cycles, break down plant mass (think biofuels ), enhance plant health, cause diseases, and … and archaeal genome sequences have been generated using techniques that the JGI has pioneered, including single-cell … Over the years more than 3,400 genomes have been sequenced from curated DSMZ isolates, for which quality DNA has been …
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