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For the Tiniest Archaea, A Genomic Switch of Friend or Foe
… Meta-omics datasets show that CRISPR-Cas systems determine mutualism or parasitism between some archaeal hosts and their hitchhikers. The Science Within the archaeal domain, there is a group of tiny … Research Laboratory, Hokkaido, Japan. From samples of both environments, they used fluorescence  in situ hybridization …
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Streamlining Regulon Identification in Bacteria
… RIViT-seq technology could speed up associating transcription factors with their target genes. The … that can be turned on or off by the same regulatory protein. Researchers demonstrated the efficacy and potential of … ensuring genes vital for growth and survival across various environments are expressed when their functions are needed. …
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Ben Bowen
… Specializing in mass spectrometry-centered projects, Dr. Bowen’s work … scientific discoveries, supporting the DOE’s Biological and Environmental Research user community in their bioenergy and environmental objectives. … BS – University of Arkansas, Fayetteville, Chemical Engineering Ph. D. – Arizona State University, Tempe, Chemical …
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Dealing with Drought: Uncovering Sorghum’s Secrets
… genes respond to drought stress. The Science Fields of drooping stalks and cracked earth are becoming common images in … through which sorghum is equipped to deal with adverse environmental conditions, researchers hope to improve yields … crops under water-limited conditions. Summary In humans, traits such as height or susceptibility to certain diseases …
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John Vogel
… Dr. Vogel joined JGI in 2014 to establish a plant functional genomics program. … Biologist at the USDA for 12 years where he was a driving force behind the development of numerous genomic resources that … grass that is well suited to experimental manipulation in the laboratory because of its compact genome, diploid …
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Charting Progress toward Professional Goals
… Select interns look back on meaningful lessons from their summer experiences at the JGI Berkeley Lab offers a variety of programs to help inspire and train the next generation of STEM professionals. …
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Researching and Solving Real-World Problems with the 2023 JGI-UC Merced Interns
… For the first time in several years, the DOE Joint Genome Institute hosted several UC Merced students this … Tomas Tyml and Frederik Schulz, Eukaryotes in Extreme Environments Theo Loreaux and mentors Simon Roux and …
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Busting the Unbreakable Lignin
… of plant components   The Science There are three main ingredients to tackle when it comes to breaking down a plant for energy: Cellulose, hemicellulose and … acknowledge their funding sources: Office of Biological and Environmental Research of the U.S. Department of Energy …
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Gut Fungi: Unexpected Source of Novel Chemicals
… Fungi from herbivore poop make surprisingly complex compounds — an energetically expensive feat … too costly for them. The Science Anaerobic fungi, which die in the presence of oxygen, dwell in herbivore guts and help … proteins. That work was done in collaboration with the Environmental Molecular Sciences Laboratory (EMSL), a DOE …
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Mike Sneddon
… Dr. Sneddon is the Advanced Analysis Group Lead in the Data Science and Informatics Department at the Joint Genome Institute. His team of engineers and scientists … , PCT application PCT/US2021/018050 (published 2021). Arkin, AP, et al. KBase: The United States Department of Energy …
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JGI Earth Month: Kjiersten Fagnan Reflects on Shelter-in-Place Effects
… In   April 2020, we mark both the 50th celebration of Earth … 22, and DNA Day on April 25.  On March 17, 2020, a shelter-in-place order for all residents took effect in six San … Officer Kjiersten Fagnan reflects on the personal and environmental impacts of the shelter-in-place order.     …
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Toward More Efficient Artificial Photosynthesis
… Chloroplast mimic a platform to capture and utilize carbon in a synthetic fixation cycle. The Science Chloroplasts are the factories in plant cells. Using photosynthesis, they take raw materials including … by the International Max-Planck Research School for Environmental, Cellular and Molecular Microbiology, Marburg, …
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