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Supercharging SIP in the Fungal Hyphosphere
… energy . Summary Arbuscular mycorrhizal fungi, the most widespread type of mycorrhizal fungi, live within a plant’s … interacts with them. In this case, scientists identified a wide variety of microbes, including both bacteria and …
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Pinning Down a Piece of Photosynthesis
… that photosynthesizers share. The end result was a list of genes, termed  The GreenCut2 Resource . It details 597 genes coding for proteins that are unique to … In a project led by Blaby, through what is now the  Community Science Program Functional Genomics proposal call, …
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Dan Rokhsar
… the Physics Department and in 2002 he became a Professor of Genetics, Genomics and Development after his research … by combining computational genome analysis, sequence-based genetic methods, and comparative developmental biology. In … Publications … Selected Publications …
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Rex Malmstrom
… isolating individual bacterial cells and amplifying their genetic material, thus bypassing the need to culture these … 113 (28), E4069-E4078 Bendall, M.L. et al. 2016. Genome-wide selective sweeps and gene-specific sweeps in natural bacterial populations. ISME …
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DAS Tool for Genome Reconstruction from Metagenomes
… how individual microbes interact with each other in a community, and characterizing their individual … complete genomes of individual, unknown microbes in the community. Since the inception of the Emerging Technologies … and characterizing entire microbial genomes from sequences generated from environmental samples. The work aligns with …
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Nick Everson
… from 2015 to 2018, representing Berkeley Lab in this UC-wide staff advocacy group …
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A Grass Model to Help Improve Giant Miscanthus
… (polyploidy) and insights into the dynamics of gene expression as it grows back vigorously year after year … and more complex patterns of inheritance. The additional genes provided by these chromosomes can contribute to novel … polyploidy, and how genomes respond to extra chromosome and gene copies, will help researchers improve Miscanthus …
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Climate Change Threatens Base of Polar Oceans’ Bountiful Food Webs
… microbiomes that influence algal diversity and gene expression. Sailing from pole to pole on four research … algal communities on filters, they sequenced DNA ‘marker’ gene sequences to identify the microbes. And in order to … RNA transcripts. All sequencing was done through the JGI Community Science Program . Using an ecology metric called …
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Ben Bowen
… the DOE’s Biological and Environmental Research user community in their bioenergy and environmental objectives. … to HAMLET-induced death; c-Myc and glycolysis. Oncogene, 30(48), 4765–4779. Google Scholar. … Selected Publications …
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A Plantiful Future: Xiaohan Yang
… Laboratory, believes they can. And, what’s more, that using gene editing technology to conscientiously mix traits of …
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JGI@25: Mapping Switchgrass Traits with Common Gardens
… 2007, the JGI has been working on identifying switchgrass genes related to biomass production, drought tolerance, and … data portal Phytozome. The combination of field data and genetic information has allowed the research team to … Just as the common gardens have flourished, so has the community of switchgrass researchers grown. After almost two …
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JGI announces 2023 CSP Functional Genomics awardees
… and omics capabilities to enhance understanding of gene and genome function.  Below find a list of the six …
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