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Salinity tolerance mechanisms of an Arctic Pelagophyte using comparative transcriptomic and gene expression analysis
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Expanding Virophage Diversity
… By mining more than 14,000 publicly available metagenomic datasets in JGI’s  Integrated Microbial Genomes & … the air, plant rhizosphere, wastewater, and even animal and human (for the first time) gut and taxonomically classified into 27 distinct clades (17 of them without previously known …
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Marine Synechococcus isolates representing globally abundant genomic lineages demonstrate a unique evolutionary path of genome reduction without a decrease in GC content
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Mike Sneddon
… in the Data Science and Informatics Department at the Joint Genome Institute. His team of engineers and scientists … annotation pipelines that support JGI’s portals, tools, and the DOE’s emerging AI-enabled capabilities for … leader in data, software, compute, and AI for large-scale genomics and lab informatics. Prior to joining JGI in late …
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Charting Progress toward Professional Goals
… to projects that will help them build skills and tools, they gain invaluable scientific and technical experiences.  Genomic data scientist Deanna Beatty sat down with interns … them to learn more about communicating science, utilize the insights they gained from their mentors, and apply their …
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Mining Metagenomes for Cas Proteins
… characterized at UC Berkeley and the Innovative Genomics Institute.  The Science Researchers report the … possible by mining the datasets in the Integrated Microbial Genomes and Microbiomes (IMG/M) suite of tools managed by the U.S. Department of Energy (DOE) Joint …
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PlantSEED enables automated annotation and reconstruction of plant primary metabolism with improved compartmentalization and comparative consistency
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Comparative transcriptomics and metabolomics reveal specialized metabolite drought stress responses in switchgrass (Panicum virgatum)
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A Cost-Efficient Way to Convert Yeast into a Cell Factory for Hydroxyapatite
… describe a strategy to recover high value products from human waste. They   genetically modified yeast to … of Energy national user facilities – the DOE Joint Genome Institute and the Molecular Foundry – both located at … highlights an  ongoing partnership that combines the JGI’s genomic capabilities with the Foundry’s nanoscale materials …
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Metagenome-assembled genomes of phytoplankton microbiomes from the Arctic and Atlantic Oceans
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Genome Streamlining, Proteorhodopsin, and Organic Nitrogen Metabolism in Freshwater Nitrifiers
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Genomic variation within the maize stiff‐stalk heterotic germplasm pool
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