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Exploring Possibilities: 2022 JGI-UC Merced Interns
… Edward Lu and mentor Miguel Romero Sean Saki and mentors  Zhong Wang and Bryce Foster Sivagunalan Thamilarasan and mentors Zhong Wang and Bryce Foster Feng Yu and mentors Zhong Wang and Bryce Foster Irina Birskis Barros and mentors …
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Trent Northen
… programs using mass spectrometry for energy and environmental research, including through the Joint BioEnergy … available to JGI users.  Dr. Northen’s research is focused on using metabolomics to link genomes with environments to understand how webs of microbes cycle carbon and …
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Gene Expression: From On-Off Switch to Dial
… Fine-tuning metabolic gene expression helps identify variants in yeast genes. The Science … a more nuanced library approach to tuning gene expression in metabolic pathways. Compared to the traditional way, which leverages an all-or-nothing approach to … No. FA9550-14-1-0089, the Camille and Henry Dreyfus Foundation, and the JGI Synthesis Program under FP00005685. In …
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Tracing the Evolution of Shiitake Mushrooms
… New genomes highlight the diversity of white rot fungi in the genus … genus Lentinula, which have evolved to decompose hardwoods on every continent besides Europe and Antarctica. A  new … wild Lentinula species compared with farmed cultivars, highlighting a potential conservation threat for wild species. …
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Refining the Process of Identifying Algae Biotechnology Candidates
… biofuels seems fairly simple: place these algae in a container with access to sunlight, water and carbon dioxide so they can grow, and then … biofuels sourced from algae. The collaborative approach highlights how the pipeline could help researchers accelerate …
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Mapping Heat Resistance in Yeasts
… A new approach for improving functional annotation in fungal genomes. The Science In a … from across the fungal Tree of Life, but they also highlight the corresponding need to be able to assign functions … have been separated for millions of years. The study highlights the genes that could be used to make other fungal …
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Matt Blow
… these teams provide analysis support and R&D for production and user science. He received his Ph.D. from the Wellcome … Blow carried out postdoctoral work at LBNL, where he worked on computational and experimental approaches to study genome regulation … Trust Sanger Institute, UK and Lawrence Berkeley National Lab …
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The Case for Conservation
… help improve crop yields.  The Science The fire moss Ceratodon purpureus is a short plant with a complex genome . Now, … of chromosomes, are available. The genome assemblies highlight the multiple advances in sequencing technologies applied to the effort. The Impact Found on all continents, including Antarctica where it is a major …
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JGI@25: Following Fungi that Pry Apart Plant Polymers
… number of notable achievements that showcase our collaborations and capabilities to enable great science that will help solve energy and environmental challenges.   Usually, plants have the upper hand … against any kind of biomass breakdown. They’ve spent millions of years evolving tactics against potential threats. …
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Engagement Webinar: How to Successfully Apply for a CSP Proposal
… On September 1, JGI held a JGI Engagement: Pro Tips for Successful Community Science Program (CSP) Applications Webinar inviting researchers to submit white papers to the CSP  New Investigator call for proposals.  Tips: Contact us with your questions ([email protected]) …
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New and Improved: Eucalyptus Reference is Now Accessible
… assembly to support targeted tree breeding for the bioeconomy.   The Science Researchers report a new reference genome for eucalyptus in the July edition of the journal G3 Genes | Genomes | Genetics , with … inherited from each parent. It also has 700-fold greater contiguity, meaning the genome is reconstructed in much …
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From Berkeley to Binghamton: Tracking Strawberry Evolution
… In the summer of 2015, Adam Session was a postdoc working at the DOE Joint Genome Institute … with the University of California, Berkeley. Nowadays, Session is an Assistant Professor at Binghamton University in New York. He and Rokhsar have  recently …
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