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Matt Blow
… Dr. Blow joined the JGI in 2009, and currently heads the Genome Analysis group. In this role he supervises the Genome Assembly, QA/QC, and User Support Analysis … BS in Biochemistry and Biological Chemistry, Nottingham University, UK PhD in Genomics, University of Cambridge, UK …
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PhycoCosm Tutorial
… Learn more about PhycoCosm, the largest interactive collection of sequenced algal genomes, omics data and comparative analysis tools developed by the Joint Genome Institute …
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Training the Next Generation of Talent
… New Graduate Internship Program Builds Bridges Between DOE JGI, UC Merced Days after … as a first-year graduate student in the Quantitative Systems Biology (QSB) Group under the School of Natural … says. “Many academic labs don’t know how to analyze RNA-Seq data very well, sending it out to companies. I’ll take that …
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Mapping Heat Resistance in Yeasts
… A new approach for improving functional annotation in fungal genomes. The … and improve functional annotation to harness the genomic data. Reported October 8, 2018, in Nature Genetics , a team … phenotype using a strategy called reciprocal hemizygosity analysis via sequencing (RH-Seq). Strains of S. cerevisiae …
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2025 NeLLi Symposium
… and postdocs): $250      Hosted by the DOE Joint Genome Institute, the University of Nevada, Las Vegas, and the Desert Research … Symposium, join us for a 1.5–day jamboree on November 6–7 focused on improving cultivation and genomic coverage. … The NeLLi Symposium will take place at The Marjorie Barrick Museum of …
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JGI Workshop at SIMB NP Meeting
… Jan. 7: New Capabilities to Study Secondary Metabolism   Although … a large number of secondary metabolites yet to be discovered and their biosynthetic logics to be understood, …
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An Age of CRAGE: Advances in Rapidly Engineering Non-model Bacteria
… A group led by JGI scientists have made strides in improving and applying a method that … has already demonstrated CRAGE as a versatile engineering system that allows scientists to conduct genome-wide screens …
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From Berkeley to Binghamton: Tracking Strawberry Evolution
… In the summer of 2015, Adam Session was a postdoc working at the DOE … Dan Rokhsar, who also holds a joint appointment with the University of California, Berkeley. Nowadays, Session is an … came up with this new method, Session mentioned that the analysis for determining the evolutionary history of …
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A Natural Mechanism Can Turbocharge Viral Evolution
… Understanding how a fundamental mechanism of evolution allows microbes to adapt to … has looked for DGRs in a broad range of publicly available datasets. They’ve discovered that DGRs are not only … Moreover, the discovery of more than 30,000 DGRs in this analysis, a 20-fold increase over what was previously known, …
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Complete genome sequence of Planctomyces brasiliensis type strain (DSM 5305T), phylogenomic analysis and reclassification of Planctomycetes including the descriptions of Gimesia gen. nov., Planctopirus gen. nov. and Rubinisphaera gen. nov. and emended
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Interdisciplinary delegation from the University of Duisburg-Essen explores collaborative opportunities with Lawrence Berkeley National Laboratory
… A two-day kick-off meeting held at Lawrence Berkeley National Laboratory … of topics related to structural biology, single cell and systems biology, omics, and big data science, machine learning for experimental science, … The U.S. Department of Energy Joint Genome Institute, a DOE Office of …
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Fungal Friends or Foes in Plant Roots
… between plant roots and fungi that can help or harm plant host health. The Science Researchers compared the … roots with genomes from other plant-associated fungi. Their analysis identified fungal gene families that help determine … isolates from the collection. The team then compared this dataset against nearly 80 previously published fungal …
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