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JGI@25: Solving the Mystery of the Missing Oil
… nearly five million barrels of light crude oil spilling into the Gulf of Mexico, researchers at Lawrence Berkeley … the thousands of bacterial and archaeal species using a DNA-based array developed at Berkeley Lab. Over the next … at exactly what happens at all levels and developing models for cellular properties, communities and ecosystems.” …
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Computationally Classifying Fungal Lifestyles
Machine learning methods were applied on sequenced fungal … and evolution of  Dothideomycetes could provide more insights into how these fungi have adapted to stress and host …
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Introducing New Members of the JGI User Executive Committee
… “you-wren”) of the University of Arizona! They join nine other JGI users already serving on the UEC – go here to … Additionally, she noted, “I would also like to offer my insights in promoting diversity, equity and inclusion (DEI) …
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Clarence Le
… and analyzes novel clades of RNA viruses and determines novel viral gene functions that may impact hosts and …
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Axel Visel
Dr. Visel joined the DOE Joint Genome Institute in 2010. As the Deputy for Science Programs, he focuses on …
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From Competition to Cooperation
Tracking evolution of symbiotic lifestyles across multiple fungal lineages. The Science By comparing 135 fungal sequenced … species, such as nutrient transporters, were co-opted into symbiotic functions. Recently published in  Nature …
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The Case for Conservation
How sex chromosomes “older than dinosaurs” could help improve crop yields.  The Science The … sequences of the male and female plants, each representing a single set of chromosomes, are available. The genome … applications. These applications include crop improvement insights that could benefit candidate biofuel crops. Summary …
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A Complex Confection Decoded: Sugarcane Reference Genome
… genome and now crop researchers can work toward advancing sugarcane biotechnology. The Science Considered the … can adapt to future environmental conditions. Additionally, insights from the genome could help scale sustainable … effects of breeding practices that transformed sugarcane into production factories for sugar and biomass. …
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Streamlining Regulon Identification in Bacteria
RIViT-seq technology could speed up associating transcription factors with their target genes. The … that can be turned on or off by the same regulatory protein. Researchers demonstrated the efficacy and potential of regulon identification by in vitro transcription-sequencing (RIViT-seq) to facilitate …
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Applying Viral Genomics Expertise to Understanding the Human Virome
… tools and data hub for NIH program. While the microbes in, on and around Earth outnumber the stars in the Milky … viral genomes. This includes (i) classifying viruses into groups that can be compared across studies, (ii) … are similarly poised to contribute transformative insights into the human virome and its implications for …
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In Hot Spring Microbial Mat, Viruses Ride “Piggyback”
… a team has comprehensively described host-virus dynamics in a microbial mat. The Science In microbial mats, communities of microorganisms live among … the predator-prey dynamics in these mats helps constrain models that estimate biogeochemical fluxes. Summary Previous …
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JGI on the 2020 Highly Cited Researchers List
… those recognized by Clarivate Analytics as “true pioneers in their fields over the last decade, demonstrated by the production of multiple highly-cited papers that rank in the top 1% by citations for field and year in the Web of Science.” Less than 6,200 researchers working …
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