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… operationalizing new genomic technologies, integrating automated liquid handling and bioinformatics pipelines to transition bench-scale methods into … functional genomics capabilities through process automation and method development. … of California, San Diego Postdoctoral training in bioinformatics, Lawrence Berkeley National Lab …

… assembly of environmental microbiomes.” JGI’s Chief Informatics Officer  Kjiersten Fagnan touted the long-standing … to assemble, for the first time these large environmental  microbial data sets for JGI users, which include projects … looking at wildfire impacts, carbon cycling, and the microbial dynamics in freshwater lakes over a several year …

… metabolites for multiple applications. The planet’s microbial diversity is immense, yet much of it remains … diseases, and produce antibiotics. Still, the team estimates that genomic information is only available for a … “This project has helped to define the current shape of the microbial tree of life by filling in genomic information for …

… seminars as well as practical hands-on sessions in bioinformatics and biostatistics. Several sessions will be devoted to training in the use of the Integrated Microbial Genomes & Microbiomes (IMG/M) system, presented by Rekha Seshadri and Mateus Fiamenghi from the Microbiome Data Science group. …

… Impact Sphagnum’s impact on global carbon cycling and climate is estimated to be larger than any other single plant genus. Peatlands accumulate partially decomposed matter, and researchers estimate that they hold about 25 …

… A group led by JGI scientists have made strides in improving and applying a method that allows … Mouncey. Using CRAGE, JGI has established a portfolio of microbial hosts that users can select to be engineered. … synthetic  E. coli strains in co-culture. Yoshikuni, Matt Blow, and their team have also harnessed CRAGE to …

… and developing RNA barcoding systems to optimize microbial bioreactors. This genomic research creates new … to unravel functional capabilities of plants, microbes and microbial communities, and understanding of natural …

… metatranscriptomics and genome assembly to investigate microbial and plant metabolism across diverse ecosystems — … including biological routes for critical minerals recovery, microbial pathways for high-value bioproducts, and … in the October 2026 review. You can also find more information about the JGI’s  various proposal calls here. …

… for users requiring multiple omics methods to examine microbial chemical production. The Science Soil bacteria in … a blueprint that engineers can use to design more efficient microbial factories. Identifying specific genes, regulatory … processes for producing industrial chemicals, specialty materials and high-value bioproducts. This study offers a …

… at JBEI and analyzed by the GLBRC. By providing snapshots of the types of chemical bonds in plant cell walls, it …

… showcase how researchers are utilizing deep learning to automatically generate insights from metagenomic data. In deep … (CRD), in order to create more useful tools for the bioinformatics community. Other work presented at the workshop … Lab’s Biological Systems and Engineering), to assign microbial taxa (Andrew Tritt of CRD and, independently, Ying …