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… to aid with genome assembly and transcriptome analysis of microbial, fungal, and plant research projects.  More … Note that beyond quantity, input quality (i.e., presence of “intact” high-molecular weight DNA) is an important … currently sequenced without pooling, which yields ~ 180 Gb of data per library. Q: How much DNA/coverage is required …

… genome . Now, high-quality reference genome sequences of the male and female plants, each representing a single set of chromosomes, are available. The genome assemblies highlight the multiple advances in sequencing technologies … Cross-Disciplinary Training Grant, Sigma-Xi Grant-In-Aid of Research, and Society for the Study of Evolution Rosemary …

… fields over the last decade, demonstrated by the production of multiple highly-cited papers that rank in the top 1% by citations for field and year in the Web of Science.” Less than 6,200 researchers working in 21 … available on the JGI’s  Integrated Microbial Genomes & Microbiomes (IMG/M) platform. Nikos Kyrpides and  Simon Roux …

… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and … Chlamydomonas is a single-celled alga with a unique place in evolutionary history. Retaining ancestral features of … C. zofingiensis on Phytozome …

… a new reference genome for eucalyptus in the July edition of the journal G3 Genes | Genomes | Genetics , with … both haplotypes, meaning it separately represents the sets of chromosomes inherited from each parent. It also has … and 2014 diploid genome reference was visualized with GENESPACE, a computational tool for comparative genomics.   With a …

… Before 2006, Olpidium was one of the many obscure fungi of Chytridiomycota (the “chytrids”).  A collaborative team … happened once during the terrestrialization of fungi. The placement of flagellated zoosporic Olpidium within the … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science …

… In the summer of 2015, Adam Session was a postdoc working at the DOE Joint … who also holds a joint appointment with the University of California, Berkeley. Nowadays, Session is an Assistant Professor at Binghamton University in New York. He and Rokhsar …

… Leveraging decades of technological development, dozens of reference genomes and thousands of resequenced sorghum … with resequencing of 1,984 cultivars and landraces, these data capture the diversity of this crop across … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science …

… For many scientists, the culmination of their work into a written report that is published in a … above all else, determination. Rhondene Wint, an alumna of the DOE Joint Genome Institute (JGI)-UC Merced internship … “This was very exciting to see how Rhondene not only embraced the research question and applied it to such a large …