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Natural Prodcast Episode 20: Brian Bachmann
… … DAN UDWARY: Hey everyone and welcome back to a new session of Natural Prodcast. I’ve got two things I wanted to tell … this week is with Professor Brian Bachmann from Vanderbilt University’s Chemistry Department, where he is the PI of the … by chemical synthesis and make analogs in combination of mutagenesis and direct evolution. Yeah. DAN UDWARY: So it’s …
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Pinning Down a Piece of Photosynthesis
By studying the structure and function of a cyanobacterial protein, researchers have new insights … across the Albert Einstein College of Medicine, Washington University in St. Louis and the University of California at Berkeley, as well as other DOE …
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Ancient Algae Reveal Secrets of Plant Evolution
… 600 million years ago. The Science By studying the genes of land plants’ closest algal relative,  Zygnematophyceae , … Genetics by an international research consortium led by the University of Nebraska-Lincoln and University of Goettingen, this research provides critical …
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A Shrubbier Version of Rubber
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Learning to Look
… “Where’s Waldo?” readers need to look for a number of distinguishing features. Several characters may be … use to conduct a similar type of search in microbial and metagenomic databases. In this case, the machine “learned” to … in bacterial immunologist Joe Bondy-Denomy’s lab at the University of California, San Francisco. Both are co-authors …
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Finding the Fermenters
… researchers built an interactive and comprehensive database of fermentative prokaryotes. The Science Most organisms use … biofuels and other bioproducts. Summary Researchers at the University of California, Davis and UC Santa Barbara … also used the tool to predict possible functions from 733 metagenome-assembled rumen genomes. Finally, they used the …
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Evolution of a Fungal Gene Expression Regulator
Describing the largest analysis to date of the modified DNA base 5mC variations in fungi. The … and fungi run the gamut from mutually beneficial to antagonistic. In fungi, 5mC is often found in transposable … Ecology & Evolution , a team led by Robert Schmitz at the University of Georgia and including JGI researchers …
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JGI@25: Tracking & Subduing the Plague of California’s Oak Woodlands
In honor of the JGI's 25th anniversary in 2022, we have revisited a … led by the JGI and Virginia Polytechnic Institute State University, was released to the public in a highly-cited … the SODmap Mobile app enabled SOD Blitz participants to geotag specimens they collect. Later, those are annotated with …
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Cataloging the Microbes that Manage the Health of River Systems
Database provides details on river microbes in 90% of US continental watersheds. The Science In a recent Nature … Through the JGI’s Community Science Program, Colorado State University researchers led a consortium to study river … National Laboratory. The JGI sequenced over 1,000 metagenomes and established standardized sequencing protocols …
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The Case for Conservation
… genome . Now, high-quality reference genome sequences of the male and female plants, each representing a single … “Why bother keeping this?” For Stuart McDaniel’s lab at the University of Florida, an answer is in sight for a similar … DEB-1239992 to N.J.W.; the Emil Aaltonen Foundation and the University of Turku to S.O.; and NSF DEB1541506 to J.G.B. …
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Toward More Efficient Artificial Photosynthesis
Planck Institute (MPI) for Terrestrial Microbiology and the University of Bordeaux have developed a platform that mimics … French Government ‘Investments for the Future’ Programme, University of Bordeaux Initiative of Excellence (IDEX …
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Natural Prodcast Episode 18: A CSP Primer
… while, but Natural Prodcast is back again for another round of episodes. If you stick around for the next few months, … a mixture of, for example, metatranscriptome sequencing, metagenomics, single cell genomics. We even do the flow … for you, we sequenced thousands for you or thousands metagenomes. And I think also the quality that we provide. So …
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