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Data Discovery Tool Helps Identify Microbial Roles within Metagenomes
… Protein annotations provide insights into environmental … scientists and researchers more about the patterns and functions of environmental microbes. Researchers can use the … predicted functional and metabolic roles across global metagenomes (within IMG).  The Impact The initial analysis …
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Computationally Classifying Fungal Lifestyles
… Machine learning methods were applied on sequenced fungal genomes to classify gene families. The … The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, … Dothideomycetes genomes were conducted as part of the 1000 Fungal Genomes Project supported by the JGI Community …
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Synthetic Biology Lab
… The Synthetic Biology lab is divided into a DNA synthesis production group and a synthetic … on developing methods for converting digital information from sequence databases into biotechnological or … design principles for successfully engineering pathways to function in heterologous hosts, by combining combinatorial …
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Webinar: MycoCosm Tutorial
… data portal , an interactive collection of sequenced fungal genomes, omics data and comparative analysis tools. … While are still working on finalizing the tree and related publication the tree is still in development and not … 15.  Q: What is the user annotation process (are these functional annotations) and how are these integrated within …
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Doubling Down on Known Protein Families
… Using a novel computational approach, researchers confirm microbial diversity is wilder than ever. Imagine researchers exploring … Oct. 11, 2023 in  Nature highlights the vast array of functional diversity of microbes through a novel approach to … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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Engagement Webinar: Utilizing long-read sequencing for metagenomics and DNA modification detection
… This webinar focused on how the JGI employs single-molecule, … genome assembly and transcriptome analysis of microbial, fungal, and plant research projects.  More recently, these … weight DNA) is an important factor as well for PacBio metagenomes. Q: How many PacBio metagenomes can I submit?  …
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JGI Advisory Committee
… is convened by the JGI Director to provide guidance on the Institute’s strategic, scientific, technical, informatics, … external advisory body, the JAC includes representatives from all specialized JGI advisory and executive committees, … the DNA Synthesis Science User Advisory Committee, the Fungal and Algal Program User Advisory Committee, the …
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Igor Grigoriev
… Dr. Grigoriev joined the JGI in 2003, following his postdoctoral training at … the pharmaceutical industry. He holds joint appointments as Fungal and Algal Program Head at the JGI, a Senior Scientist … led annotation and analysis of diverse eukaryotic genomes, from protists to plants. In 2009, he launched the JGI Fungal …
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CSP Large Scale Call
… focused on genomic science projects that address biological functions for biomanufacturing, critical minerals and materials, inter-organismal … emphasis that are listed in the call and leverage the diversity of JGI technical and analytical capabilities. All … For the CSP Large Scale call, a Letter of Intent (LOI) is required by the due date printed below. …
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User Advisory Committees
… All staff members of the US Department of Energy (DOE) Joint Genome Institute (JGI) commit to Lawrence Berkeley National Lab’s … values, which guide the relationships we nurture in our workplace and seek to establish with our … the JGI user community and is responsible for providing input and advice on JGI policies and practices that …
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Dissolved Inorganic Carbon-Accumulating Complexes from Autotrophic Bacteria from Extreme Environments
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JGI@25: From Life at the Extremes to Editing Genomes
… In honor of the JGI's 25th anniversary in 2022, we have … nature was using it to do something important.” Related Publications:  A scoutRNA Is Required for Some Type V … doi: 10.1016/j.molcel.2020.06.022. Wright AV et al. A Functional Mini-Integrase in a Two-Protein-type V-C CRISPR …
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