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IMG/PR: a database of plasmids from genomes and metagenomes with rich annotations and metadata
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Toward a Standards-Compliant Genomic and Metagenomic Publication Record
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Complete Genome Sequence of Anaeromyxobacter sp. Fw109-5, an Anaerobic, Metal-Reducing Bacterium Isolated from a Contaminated Subsurface Environment
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CSP Large Scale Call
… on genomic science projects that address sustainable biofuel and bioproducts production, leveraging systems-based approaches to unravel functional capabilities of plants, microbes and microbial communities, global carbon … by the due date printed below. Proposals will be invited from those applicants whose LOI is approved. The letter of …
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Micro-Scale Applications Group
Micro-Scale Applications group explores the genetic makeup of natural microbial communities using a variety of cutting-edge approaches.  Our group also seeks out new … technology in order to enhance the quality of single-cell genomes and directly link functional information with …
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From Stress to Growth: The adaptive mechanisms of algae in changing Arctic waters
… ice in the Arctic has decreased by more than 30% in terms of quantity and thickness. Replacing older, thicker ice with … Biology article highlights how one microalga collected from water on the ice surface handles such fluctuations. P. … tolerating the changing salinity of the environment. ( The annotated algal genome is available on the JGI’s PhycoCosm …
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Microbial sensitivity to temperature and sulfate deposition modulates greenhouse gas emissions from peat soils
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A Collaboration to Improve Plant Genome Annotations Across Species
… which specializes in genome improvement for plants. As part of that partnership, the JGI and HudsonAlpha researchers led … – the complete set of RNA molecules transcribed from all the genes within a cell or tissue at a specific … Avinash:   JGI puts huge efforts into generating reference genomes for new species allowing it to fill gaps in the …
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Natural Prodcast Episode 19: Bill Fenical
… for you here today. We got the opportunity to talk to one of the real legends of natural products, Professor Bill Fenical from Scripps Institution of Oceanography in San Diego. Bill … So, this was when we started saying, we have to have the genomes. We have to look at the full picture of these. And …
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Getting to the Bottom of Fungal Functions Across Earth’s Forests
Across four forests, researchers have leveraged data from the 1000 Fungal Genomes project to form new connections … registers the sound — one thing is for sure: there are lots of fungi around. Within a forest’s soil, hundreds of species … over 2,000 fungal genomes. The JGI sequenced, assembled and annotated these genomes in collaboration with dozens of …
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Identifying the Microbial Cleanup Crew at a Superfund Site
PCE (perchloroethylene) found its way into the groundwater of several communities in New Mexico via leakage from a local dry-cleaner. Researchers  identified two … shallow portions of the groundwater were nearly cleared of contamination. By 2020, the water was at contamination …
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Natural Prodcast Episode 1: The Primer, Part 1
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the science and scientists of secondary metabolism.  DAN: Hey there, and welcome to the … Laboratory. Being a User Facility means that scientists from all over the world bring us big problems related to …
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