Search

… for elucidating the gene regulatory landscape of vertebrate genomes, which led to the discovery of thousands of genetic … Metagenomic discovery of biomass-degrading genes and genomes from cow rumen . Science 331, 463-7. Visel A , Zhu …

… to the release of 52,515 publicly-available microbial draft genomes generated from environmental samples around the … and already available on the JGI’s  Integrated Microbial Genomes & Microbiomes (IMG/M) platform. Nikos Kyrpides and  … and improve the quality of metagenome-assembled viral genomes. The paper appeared in  Nature Biotechnology . Igor …

… and evolutionary analysis of over fifty plant and animal genomes. He currently leads the JGI’s Computational Genomics …

… 5mC is an important piece of how they regulate their genomes, but is not well understood in fungi. A team of … reference genome for every family of fungi, the 1000 Fungal Genomes initiative of the U.S. Department of Energy (DOE) … diversity of the fungal kingdom. The abundance of fungal genomes underscores the need for a more comprehensive …

Genomes from uncultivated bacteria offers clues to ancestral … teams joined forces and data sets to describe bacterial genomes for related (“sibling”) lineages Margulisbacteria … Carnevali was working with a group of metagenome-assembled genomes (MAGs) dubbed Margulisbacteria, and had found they …

… of interest and gene copy number variation across multiple genomes.  eLife 11, e78526. Li et al., 2021.  Plant …

New genomes highlight the diversity of white rot fungi in the … around the world. By complete sequencing of 24 new mushroom genomes, and assembling genomes from 60 existing sequences, this work expands the …

… developed a method to correctly identify polyploid subgenomes without needing to know the genomes of their ancestors. The method was tested on a number of plants, including  genomes of cotton lineages and the  oilseed crop false flax …