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For the Tiniest Archaea, A Genomic Switch of Friend or Foe
… are abundant and yet exceptionally small, with mini genomes to match. As a result, they cannot process all of … microorganisms had a close relationship. Then, using metagenomes and metatranscriptomes generated by the U.S. … (Berkeley Lab), as well as publicly available metagenomes, they analyzed both host and hitchhiker genomes for …
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Overview of the Genomes OnLine Database (GOLD)
TBK Reddy gives an overview of the JGI's Genomes OnLine Database and why curated metadata matters. …
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Jane Grimwood Named HudsonAlpha Genomics Chair
… she has continued to contribute across JGI plant genomes. She has appeared on the annual Highly Cited … the first time. A 2020 Nature Genetics paper describing the genomes of the five major cotton lineages. Grimwood was also …
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Building Sphagnum Genomic Resources
… researchers are aiming to have two high quality reference genomes for peat-forming species that occupy different … of Vienna  reported recovering draft metagenome-assembled genomes for seven novel species of Acidobacteria through an …
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Jeremy Schmutz
… eukaryotic organisms from simple yeasts to large vertebrate genomes.  For the past 13 years, Mr. Schmutz has directed … of community driven science for JGI Plant Flagship Genomes and DOE relevant cellulosic feedstocks. Schmutz … scientific project management for the reference eukaryotic genomes produced by the DOE Joint Genome Institute and the …
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Model Fern Reveals Insight into DNA Thievery in Ferns
Open Green Genomes hits milestone with C. richardii The Science Fern genomes are huge, and incredibly complex — making it … in ferns could not explain the massive size of most fern genomes. A team of researchers put together a chromosomal …
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Applying Viral Genomics Expertise to Understanding the Human Virome
… workflows that allow researchers to easily analyze viral genomes. This includes (i) classifying viruses into groups … the quality and completeness of metagenome-assembled viral genomes ( Nature Biotechnology , 2021), geNomad , a tool for … robust methodologies for analyzing and understanding viral genomes and their interactions with microbial hosts. The …
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Nikos Kyrpides
… of the comparative analysis platforms for microbial genomes and metagenomes (IMG). He became the Metagenomics Program head in 2010 and has the combined Microbial Genomes and Metagenomes Program since 2011. Prior to joining …
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JGI@25: From Life at the Extremes to Editing Genomes
… is a pioneer in metagenomic studies, recovering microbial genomes from biofilm samples at the Richmond Mine in Iron … and metabolism through reconstruction of microbial genomes from the environment . Nature. 2004. 428, 37–43 …
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Game On: High School Students Drive Everglades Metagenomics Study
… able to receive training for the JGI’s Integrated Microbial Genomes & Microbiomes (IMG/M) portal for their sample … enormous data set on the IMG portal. The class discovered Actinobacteria, Acidobacteria, and Proteobacteria to be the …
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