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Natural Prodcast Episode 9: Roger Linington
… episode 9 of Natural Prodcast. This week, Alison and I talk to Roger Linington, from Simon Fraser University in British Columbia, Canada. … to try and create an open source database of all known microbial natural products. So if you think about natural … episode features our conversation with Roger Linington , from Simon Fraser University . Roger is a natural products …
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Partnerships: Myco-Ed
… fungal biology teaching labs. The purpose of the program is to: train students and professors in laboratory techniques … Myco-Ed has:  ~50 lineages selected for sequencing 16 genomes released 20 members from 15 institutions 300+ students 800+ iNaturalist … sequencing and tissue preparation), allowing participation from a growing audience. For consistency and to reduce …
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JGI announces 2025 Functional Genomics awardees
… [ Pictured from left: [Above] Hao Chen, Matthew Cope-Arguello, … genomic information into biological function. Through our  CSP Functional Genomics call , we look for projects that … crops through transcriptional network mapping, developing microbial systems to convert renewable feedstocks into …
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Programs & Platform Leads
… a leadership role in providing genome science capabilities to support BER's mission of achieving a predictive … that cross the boundaries of the Plant, Fungal, Algal, Microbial, Metagenome, Metabolomics, Secondary Metabolites, and DNA Synthesis Science Programs and draw from the infrastructure of Genomic Technologies and Data …
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The International Virus Bioinformatics Meeting 2020
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JGI Announces FY26 Large Scale Portfolio for Our Community Science Program
… [Pictured from left to right are: [Above] Sara Branco, Asdrubal … and developing RNA barcoding systems to optimize microbial bioreactors. This genomic research creates new … of sequence. “We are thrilled to support this year’s CSP awardees as they embark on ambitious projects that span …
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Natural Prodcast Episode 2: The Primer, Part 2
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … is a bacterial sacred metabolite, and ergot alkaloids come from fungi, and Taxol from plants. Plants, fungi, bacteria, … and you can see that different Frankia have different size genomes depending on what kinds of plants, and what kinds of …
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Uncovering Novel Genomes from Earth’s Microbiomes
… have uncovered genomes for just a small fraction of Earth’s microbial diversity. Because most microbes cannot be … repository of 52,515 microbial draft genomes generated from environmental samples around the world, expanding the … archaea by 44%, is now available and  described November 9, 2020 in  Nature Biotechnology . Known as the GEM (Genomes …
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JGI@25: From Life at the Extremes to Editing Genomes
… Science group led by Nikos Kyrpides , mining the Integrated Microbial Genomics & Microbiomes (IMG/M) system’s immense … collection of publicly accessible metagenomic datasets from a wide variety of ecosystems around the world, … Is Required for Some Type V CRISPR-Cas Systems Mol Cell. 2020 Aug 6;79(3):416-424.e5. doi: …
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Help from Citrus’ Bitter, Hardier Cousin
… genome sequence of trifoliate orange yields clues to disease-resistance that could prove fruitful for saving Citrus from greening disease. You’ve probably never heard of … and analyzing the genome in order to find the genetic traits responsible for  P. trifoliata ’s hardiness, …
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The Earth BioGenome Project 2020: Starting the clock
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Offerings & Capabilities
… Technologies department is   ensuring users have access to cutting-edge capabilities to help advance their science by generating data in three … rely on a multifaceted combination of genomic, transcriptomic, proteomic, phenotypic, metabolomic, imaging, sensor, …
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