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Phage–bacteria relationships and CRISPR elements revealed by a metagenomic survey of the rumen microbiome
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Partnerships: Adopt-A-Genome
… the JGI’s unpublished microbial genomes, with the expectation that faculty will work with undergraduates in the … and accountability Promote utilization of JGI products and services while nurturing a fresh cohort of users Reach the … of genome scientists and recruit new talent for biosciences.  Adopt-a-Genome has: ~20 faculty from institutions …
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DAS Tool for Genome Reconstruction from Metagenomes
… validating an integrated approach to genome recovery from metagenomes. The Science Through the JGI’s Emerging … Program (ETOP) , researchers have developed and improved upon a tool that combines existing DNA sequence binning … Researchers have been utilizing metagenomics as a way to study a collection of hard-to-culture microbes, but the …
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EcoFAB 2025: Advancing Mechanistic Microbial Science Using Fabricated Ecosystems
… Register here Book your stay at the conference venue This inaugural event will bring together researchers across major … laboratory ecosystems to help transition microbiome science from largely observational to reproducible …
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The Busy World of Deep Sea Eruptions
… The ocean depths are vast and dark. But there are hotspots on the ocean floor — underwater volcanoes and hydrothermal … St. John, Gilberto Flores, and Peter Girguis about sampling these communities, and understanding how they’ve adapted to this extreme environment.   …
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River microbiomes from around the world: Kelly Wrighton
… Kelly Wrighton and her group at Colorado State University in Fort Collins have a massive undertaking: sequencing the world’s river microbiomes. And they’re using team science to do it.   …
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From Textbook to Real World Applications
… When local students Maya Hanck of Carondelet High School and Tim Kostolansky of De La Salle High School expressed an interest in learning more about the principles of synthetic … biology, Robert Evans and Jan-Fang Cheng in the Functional Genomics group took it upon themselves to mentor them. …
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Team Science Reveals Important Protein in Poplar
… showcase potential for engineering bioenergy crops The Science Scientists at Brookhaven National Laboratory (BNL) led a team that  identified a protein … x-ray bioimaging experiments were conducted to study iron accumulation and cell wall structure in the … of Energy, Office of Science, Office of Biological and Environmental Research, as part of the Quantitative Plant Science …
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JGI@25: Fueling Investigation into Methane-Making Microbes
… In honor of the JGI's 25th anniversary in 2022, we have … specifically, from the methane-making microbes within their rumen. There is another climate-minded reason for studying rumen: Livestock live off plant matter, and their …
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Plotting a Model for Virus-Host Warfare Deep Below Ground
… viral genome found in the deep subsurface ecosystem. The Science Altiarchaea are carbon-fixing microbes and targets of multiple viruses in … below the Earth’s surface is reconstructed by combining a study of microbial communities (metagenomics) and a chemical …
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Mining Metagenomes for Cas Proteins
… to accurately edit genomes (that is, repair gene mutations, and either delete or add genes in a precise fashion) … author Lucas Harrington was a graduate student from study senior author Jennifer Doudna’s lab, and he worked … datasets from a wide variety of ecosystems around the world, conducting iterative searches using statistical …
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Rumen metagenome and metatranscriptome analyses of low methane yield sheep reveals a Sharpea-enriched microbiome characterised by lactic acid formation and utilisation
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