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… worked closely with both the Fungal & Algal Program and the Microbial Program over the past decade in gene regulatory … and biomanufacturing of sustainable fuels, chemicals, and materials. He’s worked with the JGI’s Synthesis Science …

… And also specifically, it sparked my interest in bioformatics, so that’s what I’m gonna take with me to the … bit different from what I did during the summer. But ultimately I think that my skills were very complimentary to the … at how this internship affected my future because I am a math person, I got to see kind of for the first time how …

… HTP DNA design and assembly, strain engineering and bioinformatic tool development/data analysis for synthetic biology … Wales, Cardiff, Genetics Ph.D. – University of Cambridge., Microbial molecular biology Post-doctoral positions  – …

… Fagnan began working with JGI in 2012 as a NERSC bioinformatics computing consultant, after completing a petascale … and in 2018 was hired to be the JGI’s Data Science and Informatics department head.  Dr. Fagnan is also a co-PI for the … Kjiersten Fagnan is the JGI's Chief Informatics Officer. Click to learn more about how the JGI …

… v12 links (e.g., to gene reports and organism information pages) will be seamlessly forwarded to Phytozome v13. … of the most pressing challenges of our time. For more information, please visit  energy.gov/science/office-science . …

… of methane, a potent greenhouse gas, regulate Earth’s climate. Most methane is produced in environments without … By leveraging metagenomics to sample the entirety of a microbial community out in its natural environment, … of methanogenesis. Using metagenomics eliminates confirmation bias, because it enables scientists to study how …

… Evaluation of Binning Tools for Microbial Eukaryotes in Metagenomes … Functional exploration of Phage Impact on Microbial Root …

… of the most pressing challenges of our time. For more information, please visit  energy.gov/science/office-science . …

… enzymes that fix nitrogen — nitrogenases — other enzymatic machinery harvests sulfur from gaseous organic sulfur … compounds in the atmosphere.  Beyond bacteria, this enzymatic machinery has potential as an industrial workhorse. As … hydrocarbons, the building blocks of many of our fuels and materials.  With an eye to harnessing these nitrogenase-like …

… pre-screen DNA for enrichment? A:  The JGI uses liquid chromatography–mass spectrometry (LCMS).  We do a hydrolyzation … of the DNA and we look and quantify the isotopomers. We estimate the overall atom enrichment within the bulk community … don’t have a great way to resolve root respiration from microbial processes, but we’re not mixing the tracer with …

… who pitched potential collaborations were: Simon Roux and Matthew Kellom for the JGI Metagenome Program Ellen Dow and …

… operationalizing new genomic technologies, integrating automated liquid handling and bioinformatics pipelines to transition bench-scale methods into … functional genomics capabilities through process automation and method development. … of California, San Diego Postdoctoral training in bioinformatics, Lawrence Berkeley National Lab …