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Duplications and losses of genes encoding known elements of the stress defence system of the Aspergilli contribute to the evolution of these filamentous fungi but do not directly influence their environmental stress tolerance
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Uncovering Novel Genomes from Earth’s Microbiomes
… have uncovered genomes for just a small fraction of Earth’s microbial diversity. Because most microbes cannot be … in regulating nutrient cycles, as well as gaining insights into potential applications they may have in a wide … Berkeley National Laboratory (Berkeley Lab), and the  DOE Systems Biology Knowledgebase (KBase) . Metagenomics is the …
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Microbial Diversity for Biotechnology
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Degradation Reduces Microbial Richness and Alters Microbial Functions in an Australian Peatland
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A Natural Mechanism Can Turbocharge Viral Evolution
… The first step in the deadly dance between a virus and microbial cell is an embrace. For a virus with a “head-tail” … on its tail fibers to latch onto a specific target on the microbial cell’s membrane. Two decades ago, a team … the doors to characterizing how DGRs work at the molecular level. Scientists might then harness them as molecular tools …
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New Research Sheds Light on Diversity in the Deep Sea
… Microbial communities living near hydrothermal deep-sea … survive in very hot, high-pressure and chemically-rich ecosystems. This means they hold clues for understanding how … specific environmental conditions — like temperature, pH levels or the availability of certain nutrients — influence …
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Scaling Up Existing Skill Sets
… internship opportunities in fields ranging from plant-microbe interactions to functional genomics. Hear from … of the internship, 4th year PhD student in Quantitative and Systems Biology Mentor: Guohong Wu, Plant Comparative … to reach out to anyone in the Institute to get feedback and insights on the project and everyone’s willingness to guide …
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New and Improved: Eucalyptus Reference is Now Accessible
… are 900 species of eucalyptus. The trees are fast-growing plantation crops that supply wood and fiber for various … using a Brazilian tree, had a gene annotation completement level of 93.8%. The 2025 assembly has a gene annotation completement level of 99.4%.  In comparing the two assemblies, the …
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2021 JGI Proposal Call Brings New Investigators into Community Science Program
… plans to analyze and distribute data through the  DOE Systems Knowledgebase (KBase) , a free, open source data … The work builds upon a pilot project to sequence antimicrobial-producing strains. Established by Handelsman, Tiny … to crowdsource antimicrobial discovery for the control of plant pathogens, partnering with 600 instructors worldwide …
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High quality draft genome sequence and analysis of Pontibacter roseus type strain SRC-1T (DSM 17521T) isolated from muddy waters of a drainage system in Chandigarh, India
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Busting the Unbreakable Lignin
… evidence shows anaerobic fungi can degrade the hardiest of plant components   The Science There are three main ingredients to tackle when it comes to breaking down a plant for energy: Cellulose, hemicellulose and lignin, … electronic structure and functionality on the atomic level, was generated at JBEI and analyzed by the GLBRC. By …
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JGI Contributes Nine to 2022 Highly Cited Researchers List
… Group helped better-understand what the sulfur-oxidizing, carbon fixing bacterium was doing in the Guadeloupean … the cover of  Nature Reviews Microbiology ,  summarizing insights from three decades of work on giant viruses — … in  a switchgrass study that delved into the nuances of the plant’s genome . A candidate bioenergy feedstock, …
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