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Tracing the Evolution of Shiitake Mushrooms
New genomes highlight the diversity of white rot fungi in the genus … genus Lentinula, which have evolved to decompose hardwoods on every continent besides Europe and Antarctica. A  new … Researchers sequenced 11 samples from Asia–Australasia and 13 samples from the Americas to trace the evolution …
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The Case for Conservation
… help improve crop yields.  The Science The fire moss Ceratodon purpureus is a short plant with a complex genome . Now, … of chromosomes, are available. The genome assemblies highlight the multiple advances in sequencing technologies … of Evolution Rosemary Grant Award to S.B.C.; NSF DEB-1239992 to N.J.W.; the Emil Aaltonen Foundation and the …
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Matt Blow
Blow carried out postdoctoral work at LBNL, where he worked on computational and experimental approaches to study genome … Genomes from Single Bacterial Cells bioRxiv , 2024.01. 30.577819 2. Dicenzo et al. 2022. DNA Methylation in  … board member for Scientific Reports … Education … Selected Publications … Awards and Service …
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Engagement Webinar: How to Successfully Apply for a CSP Proposal
On September 1, JGI held a JGI Engagement: Pro Tips for Successful Community Science Program (CSP) Applications Webinar inviting researchers to submit white papers to the CSP  New Investigator call for proposals.  Tips: Contact us with your questions ([email protected]) …
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JGI@25: Following Fungi that Pry Apart Plant Polymers
… number of notable achievements that showcase our collaborations and capabilities to enable great science that will help solve energy and environmental challenges.   Usually, plants have the upper hand … against any kind of biomass breakdown. They’ve spent millions of years evolving tactics against potential threats. …
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Kjiersten Fagnan
… with JGI in 2012 as a NERSC bioinformatics computing consultant, after completing a petascale postdoctoral … Computing, Networking, Storage and Analysis, 2018, pp. 717-730, doi: 10.1109/SC.2018.00060. Wood-Charlson, E.M., … … About the JGI Chief Informatics Officer … Selected Publications … Awards and Honors …
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The Surprising Structure of a Shrub Willow Sex Chromosome
… hermaphrodites, expressing both male and female gametes in one individual. But some, including shrub willow  Salix purpurea , employ the evolutionary strategy we are far more familiar with: … by the National Natural Science Foundation of China (31590821, 31561123001, 31500502, 41871044), National Key …
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From Berkeley to Binghamton: Tracking Strawberry Evolution
In the summer of 2015, Adam Session was a postdoc working at the DOE Joint Genome Institute … with the University of California, Berkeley. Nowadays, Session is an Assistant Professor at Binghamton University in New York. He and Rokhsar have  recently …
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Trent Northen
… programs using mass spectrometry for energy and environmental research, including through the Joint BioEnergy … genotypes and environments. 2024 Nature Sci Data. 11, 339. https://doi.org/10.1038/s41597-024-03069-7  p.eadg7888. … … Metabolomics Science Program … Education … Selected Publications … Awards and Honors …
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
… benefits to address climate change: pulling atmospheric carbon into soil and boosting biofuel feedstocks with less fertilizer. For millions of years, underground fungi have lived in symbiosis with plant roots. Plants provide photosynthesized carbon, while fungi deliver water and nutrients. In order to do …
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Triggering Morel Fruiting
… in China and involving Francis Martin from the Institut National de la Recherche Agronomique (INRA) in France and Igor Grigoriev from the U.S. … China, and a wild black morel strain M. importuna CCBAS932 from the forests of France, were sequenced and annotated …
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New Vision, New Mission, New Plan: The JGI’s Next Five Years
… strategic plan outlines how the JGI will advance the bioeconomy, leveraging partnerships to advance foundational … for the next five years. It also includes more than 130 implementation milestones to help track and drive … that support our scientific mission.” Strategic Plan Highlights:  Nutrient cycling theme. Advancing the JGI’s ability …
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