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Maureen Berg
… Maureen is currently developing new high-resolution and high-throughput methods …
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Bacteria and Fungi Divvy Up the Work in Forest Floor
… to those from fungi when it comes to breaking down tough plant fibers. The Science Walk in a temperate forest filled … teems beneath your feet. Both bacteria and fungi have genes that can break down plant fibers. But are they both … of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley …
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Steven Wilson
… Engineering Group lead.   The group is responsible for developing and supporting applications that span the … where he added structure and process to the group by developing SOPs for instrument maintenance and operation.   …
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Engagement Webinar: Utilizing long-read sequencing for metagenomics and DNA modification detection
… and transcriptome analysis of microbial, fungal, and plant research projects.  More recently, these long-reads … but we can already provide raw mapping files as well as gene- and contig-level coverage. Other related products Q:  … has found that it’s not necessary to polish with both, and generally it’s more efficient just to make a single library …
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Refining the Process of Identifying Algae Biotechnology Candidates
… The Impact Part of the Department of Energy’s work toward developing a clean energy economy is developing alternative … of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley … stresses, and its transcriptome to learn more about which genes expression patterns. The analysis led to the …
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Jane Grimwood Named HudsonAlpha Genomics Chair
… Grimwood heads the Library Construction group for the JGI Plant Program . Her collaborations with the JGI began soon … At HudsonAlpha, she has continued to contribute across JGI plant genomes. She has appeared on the annual Highly Cited … Center), HudsonAlpha and the JGI also identified a gene related to seed dispersal in wild populations for the …
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… analysis leads to identification of biosynthetic gene clusters for novel secondary metabolites for multiple … of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley … roles in both the carbon and nitrogen cycles, break down plant mass (think biofuels ), enhance plant health, cause …
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Researching and Solving Real-World Problems with the 2023 JGI-UC Merced Interns
… Interns Andrew Lin and mentor Vy Duong, Understanding Key Genes in Photosynthesis Ravikiran Madichetty and mentors TBK … Study of Root Colonization by Resident Phages of a Plant Growth Promoting Rhizobacterium Graduate Interns … of this internship, I hope to gain professional skills, advice skills, wet lab skills and overall connections. Theo …
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DAS Tool for Genome Reconstruction from Metagenomes
… Developing and validating an integrated approach to genome … functions in processes ranging from nutrient cycling to plant health and growth. Developing a scalable computational … and characterizing entire microbial genomes from sequences generated from environmental samples. The work aligns with …
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Whole metagenome sequencing and 16S rRNA gene amplicon analyses reveal the complex microbiome responsible for the success of enhanced in-situ reductive dechlorination (ERD) of a tetrachloroethene-contaminated Superfund site
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Applying Viral Genomics Expertise to Understanding the Human Virome
… scientists at the DOE Joint Genome Institute, a DOE Office of Science user facility located at Lawrence Berkeley … nutrient cycles can help researchers contribute toward developing the bioeconomy. Now, JGI researchers are lending … viruses are likely to infect, and (iii) identifying the genetic traits of the viruses to better understand their …
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Gut Fungi: Unexpected Source of Novel Chemicals
… compounds may also be involved in how the fungi metabolize plant biomass, which could inform how scientists can more … of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley … Swift — verified that the fungi expressed biosynthetic gene clusters, which are “building blocks” of natural …
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