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Streamlining Regulon Identification in Bacteria
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … Nature Communications on June 17 , 2022, was conducted by JGI Director Nigel Mouncey and research scientist Hiroshi Otani. Both are members of the JGI’s Secondary Metabolite Science Program, which Mouncey …
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Model Fern Reveals Insight into DNA Thievery in Ferns
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … ( Learn more about OGG in  this episode of to the JGI podcast Genome Insider . ) Summary A recent paper … of seed plants and ferns. The genome is available on the JGI’s plant portal, Phytozome . Researchers hope to have …
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Extracting the Secrets of Secondary Metabolites
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … CRISPR to knock out or activate genes, researchers at the JGI were able to monitor loss- and gain-of-function. The … uncharacterized biosynthetic gene cluster. That work by JGI researchers was published April 2022 in Cell Chemical …
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A Pinch of Salt Activates Silent Gene Clusters in Streptomyces
… of multiple omics data from various environments — that JGI users can leverage to create a more complete picture of … with the Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user facility located at … Streptomyces species or related microbes can work with the JGI to apply the same integrated approach to unlock useful …
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2025 Progress Report
… JGI researchers demonstrate how their laboratory and data …
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Mapping Heat Resistance in Yeasts
… Genomics Project led by the DOE Joint Genome Institute (JGI), a DOE Office of Science User Facility of Lawrence … grew well; the survivors had their DNA sequenced at the JGI as part of a 2014 Community Science Program project. The …
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Finding the Fermenters
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … also used the tool to predict possible functions from 733 metagenome-assembled rumen genomes. Finally, they used the …
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Busting the Unbreakable Lignin
… Research Center. O’Malley is also affiliated with JBEI. The JGI data portals and pipelines helped identify potential genes responsible for lignin deconstruction. (The JGI also conducted RNA sequencing and alignment to the …
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The Surprising Structure of a Shrub Willow Sex Chromosome
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory. The JGI sequenced the shrub willows through the  Community … some songbird W chromosomes — suggest that they are advantageous enough to have evolved multiple times independently. …
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Making a Lichen Together
… the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility. Grigoriev and his team at the JGI contributed to annotation of the genomes, available …
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How Maize Makes An Antibiotic Cocktail
… as  Sorghum bicolor — a  candidate bioenergy feedstock and  JGI Flagship Plant — could produce at least 15 zealexins. … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, through its  … by a DOE Joint Genome Institute Community Science Program (JGI-CSP) grant (CSP2568 to P.Z., ES and AH), and by a …
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Charting Progress toward Professional Goals
… on meaningful lessons from their summer experiences at the JGI Berkeley Lab offers a variety of programs to help … scientist Deanna Beatty sat down with interns hosted at the JGI through three different internship programs – some … Deanna Beatty, and I'm a genomic data scientist here at the JGI, and really happy to be here to talk with some of the …
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