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MGM Workshop at Fisabio Summer School 2025
… research, the health sciences and related fields who are interested in learning and sharing concepts, tools and research results in genomics, metagenomics and the human microbiome. The workshop will train participants in …
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Microbial Genomics & Metagenomics (MGM) Workshop
… has closed.  The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is offering a five-day workshop on Microbial … familiarize users with the Integrated Microbial Genomes & Microbiomes (IMG/M) data and workflows for computational …
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A More Intuitive Phytozome Interface
… Highlighting the latest interactive version of the JGI’s plant data portal. On … it, nor had any feature updates. Phytozome  v13, which now hosts upwards of 250 plant genomes and has been under active … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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Leo Baumgart
… Dr. Baumgart joined the DOE Joint Genome Institute in 2018, following his doctoral research in synthetic … BS in Biochemistry and Cell Biology, University of California, San Diego PhD in Molecular Biology, University of California, San Diego … I. Greenblum, Abraham Morales-Cruz, Peng Wang, Yu Zhang, Lin Yang, Cindy Chen et al. "Recruitment, rewiring and deep …
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Six join FICUS program in 2026
… The JGI is excited to welcome six to the Facilities Integrating Collaborations for User Facilities (FICUS) program for … Source at Argonne National Laboratory, and the National Ecological Observatory Network (NEON) through the National …
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Biotech Partners Summer Intern Co-Authors NAR Paper
… Kaushal Sharma, one of five Antioch High School rising juniors who participated in internships at the DOE Joint Genome Institute this summer … program is now an author on a Nucleic Acids Research publication. The paper describes the version 6 data updates …
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EcoFAB 2025: Advancing Mechanistic Microbial Science Using Fabricated Ecosystems
… Register here Book your stay at the conference venue This inaugural event will bring together researchers across major ecosystems and … and applying laboratory ecosystems to help transition microbiome science from largely observational to …
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Polar Phytoplankton Need Zinc to Cope with the Cold
… Antarctic algae need their vitamins; zinc fuels some of their most important functions. Even … their frigid environment, Mock pointed out that as climate change warms polar waters, changes in trace metal concentrations will also affect … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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Methane Makers in Yosemite’s Lakes
… (a marmot!) as they’ve sampled the microbial communities living in the mountaintop lakes of the Sierra Nevada mountains. … but varied. They’re a great way to see how climate change affects freshwater ecosystems, and how those …
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Building Wet and Dry Lab Skills
… the second year of Alabama A&M University students coming to the DOE Joint Genome Institute for research and training experience … Brachypodium distachyon plant root exudates on the plant microbiome. This year, however, there was a new aspect to …
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A User-Centered Approach to Accessing JGI Data
… common set of metadata. For Steve Wilson, JGI’s Systems Engineering group lead, the Data Portal reflects a structural shift … requires that users know about the FY Funding Year, and the publication status in addition to the public/private status. … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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JGI@25: From Life at the Extremes to Editing Genomes
… In honor of the JGI's 25th anniversary in 2022, we have … For the past few years they have partnered with JGI’s Microbiome Data Science group led by Nikos Kyrpides , mining … nature was using it to do something important.” Related Publications:  A scoutRNA Is Required for Some Type V …
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