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From Competition to Cooperation
… Tracking evolution of symbiotic lifestyles across multiple fungal lineages. The Science By … to the symbiotic lifestyle. The Impact The analysis enables researchers to understand how plants and fungi developed …
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From Stress to Growth: The adaptive mechanisms of algae in changing Arctic waters
… ice with younger, thinner ice means more fresh water — and less salt — near the surface where algae grow. Armed with a better understanding … one microalga collected from water on the ice surface handles such fluctuations. P. psychrophila is a species of …
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Identifying the Microbial Cleanup Crew at a Superfund Site
… the contaminated aquifer in 2007 to achieve this goal. In less than four years, parts of the shallow portions of the … biodegradation process, researchers collected microbial samples from wells at the site in 2007, 2009, and 2010. DNA was extracted from the samples that were sequenced by the U.S. Department of Energy …
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Boosting Small Molecule Production in Super “Soup”
… process (in cell-free reactions), this framework enables biosynthesis of diverse chemical products at volumetric … environment, which would be transformative at industrial scales. “Cell-free systems have been really powerful at finding … student Xiunan Yi visited the Jewett lab to provide a seamless transition between the  in vivo  (within the cell)and  …
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Mindfully Moving JGI
… labs in one long building at Walnut Creek, after countless generations of sequencing platforms (up to 120 … 4 single-story buildings to a new 4-story building 20 miles away in another city and county began more than three … including unneeded chemicals, unopened lab consumables, unneeded Lab tagged equipment, recyclables, and general …
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JGI@25: Mapping Switchgrass Traits with Common Gardens
… gardens to track crop productivity across 1,100 miles and eight states. In 2021, using switchgrass samples from these gardens, a team led by researchers at the …
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Busting the Unbreakable Lignin
… that third component, lignin, that has historically been less of a resource to be extracted and more of an obstacle …
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Atif Shahab
… management, laboratory information tracking, and enables efficient analysis and reporting of sequencing projects … BS in Electrical Engineering, University of New South Wales, Australia; MS in Computer Science, University of New South Wales, Australia …
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Exploring Polymorphisms Created by Transposable Elements
… My project at the Joint Genome Institute (JGI) was to measure the polymorphisms that transposable elements (TEs) …
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Climate Change Threatens Base of Polar Oceans’ Bountiful Food Webs
… without a defined nucleus). Colder waters nearer the poles, however, tend to favor eukaryotes ( microorganisms with … expedition to explore, collect and catalog samples, and look for patterns in algal communities, including … communities occurs in moderate waters that have an average surface temperature of about 58° Fahrenheit (14° Celsius) — …
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Expanding Virophage Diversity
… Virophages are small viruses with double-stranded DNA genomes that co-infect eukaryotic cells along with giant viruses. Virophages are small viruses with double-stranded DNA genomes that co-infect …
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Waiting to Respire
… amplified genomes of Margulisbacteria from marine samples. The research teams opted to collaborate on a single …
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