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… the pharmaceutical industry. He holds joint appointments as Fungal and Algal Program Head at the JGI, a Senior Scientist … of California, Berkeley. He contributed to the Human Genome Project and led annotation and analysis of diverse … which resulted in over 2500 fungal genomes in the JGI MycoCosm portal. In 2018, he launched scale-up of algal …

… four forests, researchers have leveraged data from the 1000 Fungal Genomes project to form new connections between fungal … Grigoriev said. All of these genomes are available at  MycoCosm . If initially, the task of mapping fungal RNA to … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …

… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the … Takemura, whose voice you’ll hear in a minute – we work for the US Department of Energy Joint Genome Institute, or … where this happened have a tendency to be susceptible to a fungal infection of rye grain – a specific fungus, Claviceps …

… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the … of secondary metabolism.  DAN: Hey there and welcome back for Episode 8 of Natural Prodcast. This week, we have our … where I was a graduate student. Aflatoxin, of course, is a fungal natural product which is a liver toxin when humans …

… plant host health. The Science Researchers compared the genomes of fungi that colonize Arabidopsis thaliana roots … other plant-associated fungi. Their analysis identified fungal gene families that help determine if these fungi act … previously published fungal genomes on the JGI data portal MycoCosm . They looked for genes known to be involved in …

… countries. (Graphic: Neil Byers) The JGI launched the 1000 Fungal Genomes (1KFG) Project through a 2012 Community Science … genomes that are both large and complex. The first publication of a genome generated by the OGG initiative — … 1KFG project on MycoCosm … Fungal Dataset …

… sequencing, synthesis, and metabolomics at the JGI for projects of relevance to Department of Energy (DOE)  … Areas . Through this program, the DOE aims to advance genome science-based scientific research from a broad range … PIs who have never led a JGI project, and the Functional Genomics call is for projects that translate genomic …

… All staff members of the US Department of Energy (DOE) Joint Genome Institute (JGI) commit to Lawrence Berkeley National … to establish with our stakeholders. The guiding principles for participating on JGI Advisory Committees are outlined in … The UEC represents the JGI user community and is responsible for providing input and advice on JGI policies and practices …

… DAN: Hey, everybody. Welcome back for another episode of Natural Prodcast. Right now I’m … And it actually was jumping onto the I ntegrated Microbial Genomes and Metagenomes, the IMG platform that JGI has that … thing I’ve learned is that when JGI gives you a ton of data you better have someone really smart to be able to …

… The Community Science Program Large Scale call is focused on genomic science projects that address biological functions for biomanufacturing, critical minerals and materials, … for scientific merit, DOE mission relevance, proposed data usage by the applicant/community, and track record of …

… within groups, such as plants (via Phytozome) or fungi ( MycoCosm ). “We have made a concerted effort to create a … requires that users know about the FY Funding Year, and the publication status in addition to the public/private status. … metadata criteria. Wilson said that the Data Portal and  Genome Portal will continue to run in parallel for now. …

… Tracking evolution of symbiotic lifestyles across multiple fungal lineages. The Science By comparing 135 fungal sequenced genomes, researchers were able to carry out a broader … used in the study are available on the JGI fungal portal  MycoCosm . The work builds upon several papers and …