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JGI Advisory Committees Code of Conduct
Guiding Principles All staff members of the US Department of Energy (DOE) Joint Genome Institute (JGI) commit to … In working toward a shared vision with members of the JGI advisory committees, we welcome and encourage …
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DOE Metrics
… (Trillions) Operating Hours Goal Actual Total* Actual % of Goal Goal (hours)** Actual Total Actual % Goal FY 2025 … platforms. **Operating Hours target is based on 98% of the total available hours.   FY 2024 DOE Metrics There … (Trillions) Operating Hours Goal Actual Total* Actual % of Goal Goal (hours)** Actual Total Actual % Goal FY 2024 …
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Natural Prodcast Episode 2: The Primer, Part 2
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … metabolism is based on primary metabolism. It’s an evolution of primary metabolism. So a lot of the genes and … the drug. So for example, a lot of antibiotics will target specific parts of a cell wall. And so if you weaken a cell …
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CSP Functional Genomics
Genomics call is to enable users to perform state-of-the-art functional genomics research and to help them … synthesis and ‘omics capabilities to enhance understanding of gene and genome function, particularly those not readily …
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Tracing the Evolution of Shiitake Mushrooms
… molecule, lignin. Understanding Lentinula genomes and their evolution could provide strategies for converting plant … groups evolved further, to four major groups: a lineage in Australasia and L aciculospora, L. raphanica … rely on to decay wood were widely conserved across species. Specifically, many species had very similar plant cell wall …
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Natural Prodcast Episode 15: Katherine Duncan
… here today, and we wanted to talk to her about a whole list of things. So we have a Scripps background shared together, … are all really closely related things in terms of, like, evolution, in terms of taxonomy– produced really different … is a whole bunch of information that maybe never makes its publication. And these are little tips, you know, how to …
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Enlarging Windows into Understanding Gene Functions
… in sequences affect traits. In a text file, the rows of letters A, T, C and G appearing over and over in a … absence of all the other letters of the alphabet. Yet the specific sequence of these four letters represents an … where transcription factors have been repurposed during evolution to control new functions,” O’Malley said. …
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Crysten Blaby-Haas
… algae, and plants, while focusing on understanding the evolution and function of proteins involved in metal … Argüello JM and Merchant SS. (2014) Evolution of a plant- specific copper chaperone family for chloroplast copper … Google Scholar … Education … Awards and Service … Selected Publications …
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Divergence among rice cultivars reveals roles for transposition and epimutation in ongoing evolution of genomic imprinting
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Plant-Microbial Interactions Group
… are complex organisms that harbor a fantastic diversity of cell types and associated organisms, including fungal and … single-cell and spatial transcriptomics barcode-based genetics (RB-TnSeq), and computational genomics to better … of plant/environmental responses … Selected Publications … Research Team Alumni … For further details, …
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From Berkeley to Binghamton: Tracking Strawberry Evolution
… tested on a number of plants, including  genomes of cotton lineages and the  oilseed crop false flax – genomes that … but also the ability to understand the complicated evolutionary history of strawberry in such detail is … over the decade that I worked with Dan to develop this specific procedure.” The rapport they built during this …
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A Natural Mechanism Can Turbocharge Viral Evolution
Understanding how a fundamental mechanism of evolution allows microbes to adapt to changing … means using proteins on its tail fibers to latch onto a specific target on the microbial cell’s membrane. Two …
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