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JGI-TMF Critical Minerals and Materials Call
… for researchers to request the capabilities and expertise of both the Joint Genome Institute and the Molecular Foundry … seeks research proposals that integrate genomics with nanoscale science, accelerating discoveries and developing … provides customized analysis, the JGI also participates in publication of results. Go here for additionial information, …
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FICUS
… for researchers to request the capabilities and expertise of multiple DOE National User Facilities in one research … Successful applications will focus on high-risk/high-payoff proposals within the focused topic areas that can be … provides customized analysis, the JGI also participates in publication of results. …
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FICUS Overview
… to more easily integrate the expertise and capabilities of multiple Department of Energy Office of Science National User Facilities into … provides customized analysis, the JGI also participates in publication of results. … as needed), and the work plan is written into a Statement of Work document. …
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Offerings & Capabilities
… The central mission of the JGI’s Genomic Technologies department is   ensuring … metabolomic, imaging, sensor, and other data produced at scales amenable to statistical analysis. To meet these … and platforms dedicated to synthesis, single-cell analyses and metabolomics. At the same time, the team is …
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How to Submit Sequencing Samples
… Below is a brief description of the process needed to prepare and ship samples for … sample QC requirements and protocols Obtaining DNA and RNA of suitable quantity and quality has been the rate-limiting … Sample QC Protocol JGI’s Total RNA Sample QC Protocol JGI’s Small RNA Sample QC Protocol DNA Extraction 101 : tips, …
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JGI Advisory Committees Code of Conduct
… Guiding Principles All staff members of the US Department of Energy (DOE) Joint Genome Institute (JGI) commit to … you in support of team science and service for the good of humanity. Sincerely, The JGI Leadership Team : Nigel …
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Natural Prodcast Episode 21: Elizabeth Parkinson
… schedule. This should be coming out on the first Thursday of the month, just like I promised. Now I just have to make … a thioesterase. And so that thioesterase at the end of this large multimodular protein allows for release from the DNA, … So cis versus trans in order to cyclize at that small of a ring, which is highly unfavorable. DAN: Oh, I did …
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Natural Prodcast Episode 22: Alison Narayan
… Welcome back to Natural Prodcast. This continues the series of interviews we recorded at the Society for Industrial … Sure. ALISON NARAYAN: And so we usually start on small scale in the lab. So we’ll run things in like little … thing. There’s something about watching this, like, set up thousands of reactions at a time, that’s just like so …
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User Support Analysis Group
… epigenomics. Our work varies in scope from the development of highly customized analysis workflows for new product types, to the development of automated analysis pipelines for standard sequencing products performed at scale. Our group also performs ‘proof-of principle’ research …
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Cataloging the Microbes that Manage the Health of River Systems
… microbial resource that provides information at multiple scales from genes to the community level. The Impact Rivers … several access points for these datasets. As part of a larger microbiome data integration hub, these datasets are … explore and reuse the data from the GROWdb for comparative analyses with their own data on the KBase platform, without …
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Here, There and Everywhere: Large and Giant Viruses Abound Globally
… JGI-led team significantly expands the global diversity of large and giant viruses. While the microbes in a single … viruses in the same drop—the vast majority not harmful to humans could be even larger. Viruses infect bacteria, … to these challenges.  DOE’s Office of Science is the largest supporter of basic research in the physical sciences …
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Applying Viral Genomics Expertise to Understanding the Human Virome
… viruses outnumber the microbes by at least another order of magnitude. For years, scientists at the DOE Joint Genome … IMG/VR (Viral Resources.) Launched in 2016, IMG/VR is the largest publicly available collection of UViGs by … a  2019 paper , the team applied computational methods and analyses developed for JGI-enabled research involving …
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