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Micro-Scale Applications Group
… technology in order to enhance the quality of single-cell genomes and directly link functional information with … to accurately measure environmental microbiome activity levels.This functional assay lets us move beyond cataloging … DNA amplification, and sequence analysis to recover the genomes of uncultivated microbes. We also apply labeling …
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CalTeach
… focuses on STEM pedagogy, educational theory and promoting diversity, equity, and inclusion, with concurrent … allowed them to:  Learn new skills. Experience industry-level work and coding. Receive mentorship, network and gain …
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Comparative genomics and expression levels of hydrophobins from eight mycorrhizal genomes
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Natural Prodcast Episode 8: Eric Schmidt
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the … with animal metabolism itself, and it’s really amazing what diversity there is in animals. I think, even despite the … end, we took an approach that was kind of a simplified metagenome sequencing approach to pick this system apart.  DAN:  …
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Products
… Fungal Minimal Draft Lower coverage short-read whole genome shotgun sequencing Assembly, annotation ( Mycocosm ) 256/404 Fungal Standard Draft Whole genome shotgun sequencing using long-read sequencing. Exact … library types and quality of finished product depend on genome. Selected genomes will be improved based on …
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Partnerships: Myco-Ed
… genomic resources empower students through isolation and genome sequencing of new fungal species.  Students collect … Myco-Ed has:  ~50 lineages selected for sequencing 16 genomes released 20 members from 15 institutions 300+ … solution for production of high-quality fungal reference genomes, this program is an important initiative that …
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Natural Prodcast Episode 23: Aaron Puri
… And it actually was jumping onto the I ntegrated Microbial Genomes and Metagenomes, the IMG platform that JGI has that really got me … the answer would be that there’s actually a great deal of diversity within these methanotrophs for example, that are …
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New and Improved: Eucalyptus Reference is Now Accessible
… An improved genome assembly to support targeted tree breeding for the … researchers have unlocked new information on the structural diversity of eucalyptus. The 2014 genome, generated using a Brazilian tree, had a gene annotation completement level of 93.8%. The 2025 assembly has a gene annotation …
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Len Pennacchio
… In 2003, Dr. Pennacchio joined the DOE Joint Genome Institute and has focused on applying … joint appointments as a Deputy Director at the DOE Joint Genome Institute, Senior Scientist at Lawrence Berkeley … Council, National Human Genome Research Institute, NIH 2019   Lawrence Berkeley Laboratory Director’s Award for …
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Natural Prodcast Episode 4: Nancy Keller
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the … produced by Fusarium species that was produced to very high levels in South Africa, including Lesotho where I done my … them?    NANCY:  Yeah, okay. Of course. Fungi have a larger genome. The genetics was slower to begin with. So …
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Genome Sequence of Nitrosomonas sp. Strain AL212, an Ammonia-Oxidizing Bacterium Sensitive to High Levels of Ammonia
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JGI Advisory Committees Code of Conduct
… staff members of the US Department of Energy (DOE) Joint Genome Institute (JGI) commit to Lawrence Berkeley National … and JGI staff with respect and consideration, valuing a diversity of views and opinions; Exercise tolerance for …
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