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JGI@25
… genomics. The two-story mural at the Integrative Genomics Building was painted by Berkeley-based artist Nigel Sussman …
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An Age of CRAGE: Advances in Rapidly Engineering Non-model Bacteria
… that allows researchers to quickly modify diverse bacterial genomes. In 2019, the JGI’s Yasuo Yoshikuni and his team  announced in  Nature Microbiology an important addition to the synthetic biologist’s … investigating plant-microbe interactions. A final recent advance in CRAGE is the addition of CRISPR enzyme Cas9. …
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EcoFABs: advancing microbiome science through standardized fabricated ecosystems
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Frequently Asked Questions: Proposal Submission
… range from raw sequence data to well-annotated assembled genomes to synthesized DNA constructs to metabolomics data, … have technical questions, we encourage you to contact us in advance for advice. … For accepted proposals, sequencing, …
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Viral Genomics Group
… big (or small) can tailed phages be?  Nature Reviews Microbiology.   19 , 407 Berg, M. et al. (2021) Host population … in bacteria and archaea across Earth’s biomes. Nature Microbiology. 4 , 1895–1906 Roux, S. et al. (2019) Minimum …
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FICUS
… into a Statement of Work document. … Shining a Light: Advanced Photon Source Capabilities for FICUS Research … the FY25 call, introduces the resources available from the Advanced Photon Source, and contains useful tips for … Ridge National Laboratory  Center for Structural Molecular Biology . … Accessing NEON’s Environmental Sample Archives, …
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The IMG/M data management and analysis system v.6.0: new tools and advanced capabilities
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JGI@25: Using Team Science to Build Communities Around Data
… (Graphic: Neil Byers) The JGI launched the 1000 Fungal Genomes (1KFG) Project through a 2012 Community Science … State University led the effort to sequence 1000 fungal genomes to create two reference genomes for all fungi … been published. Spatafora said the work has “significantly advanced our understanding of 1 billion years of evolution …
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Natural Prodcast Episode 24: Jackie Winter and SMC
… organisms we’re finding– at least by looking at their full genomes — are really not like anything that’s been … hypersaline lakes– and start comparing and contrasting systems and then also comparing to the marine environment, … none of that is going to change. It’s only just– we’re just building onto it. So the site is usable now. The website is …
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Natural Prodcast Episode 3: The Primer, Part 3
… hits. Sort of in parallel with that, the field of molecular biology got more sophisticated around the 80s and the 90s. … DAN: Well, it is and it isn’t. It depends on different systems of secondary metabolism and the things that are in … we can find more things. Turns out some of the early genomes that were sequenced for, say, Streptomyces – they …
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CSP Functional Genomics
… review process or find details on the internal synthetic biology review process .  … Proposers are encouraged to …
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Digging into Microbial Ecosystems Deep Underground
… pretty important role in the cycling of nutrients in these systems.” -Mike Wilkins, Colorado State University GI users … at: the role viral infection may play in other natural ecosystems. The video complements a recently published paper …
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