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Complete Genome of Oil-Rich Alga Reveals Ideal Platform for Bioengineering
… decoded the genome of an oil-producing green alga, and demonstrated precise gene targeting in the genome in the … organism's ability to switch between autotrophic and heterotrophic growth enables production strategies that optimize … RNA genes with unusual structures that could be useful for protein production and other biotech applications. Engineers …
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Mindfully Moving JGI
… JGI is in the process of shifting its operations from Walnut Creek to the heart of the Berkeley Lab … 100 were silent. Twenty years after the JGI united the genomics expertise of three national labs in one long … crated, shipped to, and then installed at the  Integrative Genomics Building , JGI’s newly-built home located in the …
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JGI Earth Month: Wetlands Work in #TenHundredWords
… April marks both the 50th celebration of Earth Day on April 22, and DNA Day on April 25. As both Earth and DNA … Kaze was part of the  2018 cohort of the JGI-UC Merced Genomics Internship Program, and is part of  Mark Sistrom’s … Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy …
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Graduate Students Get Thesis Research Opportunity at the JGI
… the opportunity to pursue part of their thesis research at one of the DOE national laboratories or national user … is Mo Kaze, part of the 2018 cohort of the JGI-UC Merced Genomics Internship Program. Kaze is part of Mark Sistrom’s … gases,” Kaze said. “It’s an exciting time in the field of genomics and JGI scientists are developing cutting edge …
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Viruses Reprogram Cells into Different Virocells
… Researchers have the opportunity to combine the power of genomics and molecular characterization offered at multiple … For this project, RNA sequencing was done by the JGI, and proteomics and metabolomics analysis and microscopy at EMSL. The team infected the …
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Permanent Improved High-Quality Draft Genome Sequence of Nocardia casuarinae Strain BMG51109, an Endophyte of Actinorhizal Root Nodules of Casuarina glauca
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2024 Progress Report
… The Integrative Genomics Building (IGB) seen above is home to the DOE Joint … from the DOE Systems Biology Knowledgebase (KBase), the National Microbiome Data Collaborative (NMDC), and Berkeley Lab Biosciences Area are also co-located in the IGB. Vision  Lead genomic innovation for a sustainable bioeconomy. …
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Behind the Paper: Hot Springs Metagenomics
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Inspiring STEM Careers Through a Hands-on Everglades Microbiome Study
… Journal publication caps JGI pilot project with fledgling Florida high school … of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab), embarked on a pilot project … metagenome assembly, and even an introduction to data analysis using the  IMG/M system . A Comprehensive Learning …
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Fishing for Novel Cellulose Degraders
… single-cell genomic approach to bioprospecting. The Science One of the most vital pieces of equipment for fly fishing is … the team then used DNA synthesis and cloning, followed by protein in vitro expression and mass spectrometry-based … this microbe. The work is an example of how function-driven genomics, which Woyke and her colleagues define as “any form …
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DAS Tool for Genome Reconstruction from Metagenomes
… Program (ETOP) , researchers have developed and improved upon a tool that combines existing DNA sequence binning algorithms, allowing them to reconstruct more near-complete genomes from soil metagenomes … changes. Summary Researchers have been utilizing metagenomics as a way to study a collection of hard-to-culture …
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Complete Genome Sequences of Caldicellulosiruptor sp. Strain Rt8.B8, Caldicellulosiruptor sp. Strain Wai35.B1, and “Thermoanaerobacter cellulolyticus”
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